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Items: 8

1.

Transcriptome analysis of Paracoccus denitrificans during aerobic and anaerobic respiration (denitrification)

(Submitter supplied) Transcriptional profiling of Paracoccus denitrificans PD1222 wild type incubated in continuous culture (continuous culture (CSTR)) in minimal media with aerobic or anaerobic conditions. The goal was to define the core respiratory genes.
Organism:
Paracoccus denitrificans; Paracoccus denitrificans PD1222
Type:
Expression profiling by array
Platform:
GPL17412
6 Samples
Download data: GPR
Series
Accession:
GSE97959
ID:
200097959
2.

RNA-seq data of Paracoccus denitrificans grown under different N2O levels

(Submitter supplied) We report here the RNA seq results of sRNA enriched Paracoccus denitrificans grown under three different N2O levels (high N2O reffered to as CuL/ low N2O reffered to as CuH/ Low N2O aerobic reffered to as CuH O2)
Organism:
Paracoccus denitrificans
Type:
Expression profiling by high throughput sequencing
Platform:
GPL22301
3 Samples
Download data: WIG
Series
Accession:
GSE85362
ID:
200085362
3.

Transcriptome analysis of Paracoccus denitrificans during Cu-limitation

(Submitter supplied) Transcriptional profiling of Paracoccus denitrificans PD1222 wild type grown to mid-exponential phase in minimal media with either 13 uM (Cu-H) or 0.5 uM (Cu-L) Cu regimes. The goal was to define the effects of Cu-limitation on denitrification genes
Organism:
Paracoccus denitrificans PD1222; Paracoccus denitrificans
Type:
Expression profiling by array
Platform:
GPL17412
6 Samples
Download data: GPR
Series
Accession:
GSE48577
ID:
200048577
4.

Illumina NextSeq 500 (Paracoccus denitrificans)

Organism:
Paracoccus denitrificans
1 Series
3 Samples
Download data
Platform
Accession:
GPL22301
ID:
100022301
5.

Agilent-026900 Paracoccus denitrificans

(Submitter supplied) probes for ORFs from Paracoccus denitrificans PD1222. Design was aimed to have tiled probes of around 60 bp, every 100 bp throughout the genome, where possible" The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface)." To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions." Protocol: see manufacturer's web site at http://www.agilent.com/
Organism:
Paracoccus denitrificans
2 Series
12 Samples
Download data: GAL
Platform
Accession:
GPL17412
ID:
100017412
6.

CuL-sRNA

Organism:
Paracoccus denitrificans
Source name:
WT
Platform:
GPL22301
Series:
GSE85362
Download data: WIG
Sample
Accession:
GSM2265843
ID:
302265843
7.

CuH-sRNA

Organism:
Paracoccus denitrificans
Source name:
WT
Platform:
GPL22301
Series:
GSE85362
Download data: WIG
Sample
Accession:
GSM2265842
ID:
302265842
8.

CuH-O2-sRNA

Organism:
Paracoccus denitrificans
Source name:
WT
Platform:
GPL22301
Series:
GSE85362
Download data: WIG
Sample
Accession:
GSM2265841
ID:
302265841
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db=gds|term=txid266[Organism:noexp]|query=1|qty=3|blobid=NCID_1_189571649_130.14.22.33_9001_1568778885_2129790927_0MetA0_S_MegaStore_F_1|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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