GEO DataSets

(Submitter supplied) Aspergillus display an amazing level of diversity in physiologies, and environments that they occupy. Strategies for coping with diverse environmental stresses have evolved in different Aspergillus species. Therefore, Aspergillus are considered to be good models for investigating the adaptation and response to many natural and anthropogenic environmental stressors. Recent genome sequencing projects in several Aspergillus have provided insights into the molecular and genetic mechanisms underlying their responses to some environmental stressors. more...

Organism:

Aspergillus glaucus

Type:

Expression profiling by high throughput sequencing

Platform:

GPL24036

6 Samples

Download data: FA, TXT

(Submitter supplied) The purpose of this study is to find the differently expressed genes in Aspergillus cristatus at different osmotic pressure.

Organism:

Aspergillus cristatus

Type:

Expression profiling by high throughput sequencing

Platform:

GPL19744

3 Samples

Download data: TXT

(Submitter supplied) Long-term transcriptional adaptation was investigated by comparative transcriptome analysis of E. rubrum grown at different salt concentrations.

Organism:

Aspergillus ruber

Type:

Expression profiling by array

Platform:

GPL16608

4 Samples

Download data: TXT

(Submitter supplied) Mycotoxins are secondary metabolites which are produced by numerous fungi and pose a continuous challenge to the safety and quality of food commodities in South Africa. These toxins have toxicologically relevant effects on humans and animals that eat contaminated foods. In this study, a diagnostic DNA microarray was developed for the identification of the most common food-borne fungi, as well as the genes leading to toxin production. more...

Organism:

Claviceps purpurea; Alternaria alternata; Aspergillus multicolor; Fusarium subglutinans; Fusarium cerealis; Penicillium viridicatum; Penicillium corylophilum; Fusarium verticillioides; Talaromyces rugulosus; Fusarium solani; Stenocarpella maydis; Fusarium incarnatum; Aspergillus; Aspergillus clavatus; Fusarium oxysporum; Fusarium acuminatum; Talaromyces islandicus; Aspergillus versicolor; Penicillium fellutanum; Fusarium globosum; Pseudopithomyces chartarum; Aspergillus amstelodami; Aspergillus parasiticus; Fusarium sambucinum; Curvularia lunata; Fusarium; Talaromyces funiculosus; Bipolaris sorokiniana; Fusarium decemcellulare; Drechslera sp.; Aspergillus chevalieri; Aspergillus niger; Penicillium; Fusarium sporotrichioides; Fusarium graminearum; Penicillium expansum; Fusarium sp.; Fusarium avenaceum; Penicillium italicum; Aspergillus carbonarius; Fusarium anthophilum; Fusarium equiseti

Type:

Expression profiling by array; Other

Platform:

GPL9730

120 Samples

Download data: GPR, TXT

(Submitter supplied) 4 probes per CDS, best distribution Arrays of this design have barcodes that begin with 16040802 or 2540802. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. Protocol: see manufacturer's web site at http://www.agilent.com/

Organism:

Aspergillus ruber

1 Series

4 Samples

Download data: TXT

(Submitter supplied) Forty food-borne fungi Protocol: 1. Oligonucleotide probes ranging in size from 16 - 23 bases were transferred to Genetix X7022 384-well plates for arraying. 2. Each well contained a final concentration of 20 µM oligonucleotide probe in 50% DMSO spotting solution (v/v). 3. Between printing runs the plates were stored at -20°C. 4. Prior to printing the plates were incubated at room temperature for 30 min to aid temperature equilibration. more...

Organism:

Aspergillus; Aspergillus amstelodami; Aspergillus clavatus; Aspergillus niger; Penicillium; Fusarium; Fusarium oxysporum; Fusarium sporotrichioides; Fusarium acuminatum; Fusarium graminearum; Alternaria alternata; Penicillium expansum; Talaromyces islandicus; Fusarium avenaceum; Aspergillus carbonarius; Fusarium subglutinans; Aspergillus versicolor; Fusarium cerealis; Fusarium equiseti; Penicillium fellutanum; Penicillium corylophilum; Fusarium verticillioides

1 Series

120 Samples

Download data