txid558269[Organism:noexp] - GEO DataSets - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Search results

Items: 14

Select item 2001025571.

RNA-seq reveals quorum sensing-dependent activation of genes involved in ecological fitness during Pcb1692 potato-host infection

(Submitter supplied) Pectobacterium carotovorum subsp. brasiliense 1692 (Pcb1692) is an emerging pathogen of significance affecting potato production globally. In the current study, we reveal the complete transcriptome of Pcb in planta at the early and later stages of infection (24 and 72 hour post inoculation (hpi), respectively) using RNA-seq. We identified713 differentially expressed genes at 24hpi and an additional 157 differentially expressed genes at 72 hpi. more...

Organism:: Pectobacterium brasiliense PBR1692

Type:: Expression profiling by high throughput sequencing

Platform:: GPL23900
12 Samples

Download data: TXT

Series

Accession:: GSE102557

ID:: 200102557

SRA Run Selector

Select item 1000239002.

Illumina HiSeq 2000 (Pectobacterium carotovorum subsp. brasiliensis PBR1692)

Organism:: Pectobacterium brasiliense PBR1692

1 Series
12 Samples

Platform

Accession:: GPL23900

ID:: 100023900

Select item 3027409013.

Pcb1692ΔexpI_E24-2

Organism:: Pectobacterium brasiliense PBR1692

Source name:: Pcb1692ΔexpI_in planta at 24

Platform:: GPL23900
Series:: GSE102557

Sample

Accession:: GSM2740901

ID:: 302740901

SRA Run Selector

Select item 3027409004.

Pcb1692ΔexpI_E24-1

Organism:: Pectobacterium brasiliense PBR1692

Source name:: Pcb1692ΔexpI_in planta at 24

Platform:: GPL23900
Series:: GSE102557

Sample

Accession:: GSM2740900

ID:: 302740900

SRA Run Selector

Select item 3027408995.

Pcb1692ΔexpI_CE-3

Organism:: Pectobacterium brasiliense PBR1692

Source name:: Pcb1692ΔexpI_in Vitro

Platform:: GPL23900
Series:: GSE102557

Sample

Accession:: GSM2740899

ID:: 302740899

SRA Run Selector

Select item 3027408986.

Pcb1692ΔexpI_CE-2

Organism:: Pectobacterium brasiliense PBR1692

Source name:: Pcb1692ΔexpI_in Vitro

Platform:: GPL23900
Series:: GSE102557

Sample

Accession:: GSM2740898

ID:: 302740898

SRA Run Selector

Select item 3027408977.

Pcb1692ΔexpI_CE-1

Organism:: Pectobacterium brasiliense PBR1692

Source name:: Pcb1692ΔexpI_in Vitro

Platform:: GPL23900
Series:: GSE102557

Sample

Accession:: GSM2740897

ID:: 302740897

SRA Run Selector

Select item 3027408968.

Organism:: Pectobacterium brasiliense PBR1692

Source name:: WT_in planta at 72

Platform:: GPL23900
Series:: GSE102557

Sample

Accession:: GSM2740896

ID:: 302740896

SRA Run Selector

Select item 3027408959.

Organism:: Pectobacterium brasiliense PBR1692

Source name:: WT_in planta at 72

Platform:: GPL23900
Series:: GSE102557

Sample

Accession:: GSM2740895

ID:: 302740895

SRA Run Selector

Select item 30274089410.

Organism:: Pectobacterium brasiliense PBR1692

Source name:: WT_in planta at 24

Platform:: GPL23900
Series:: GSE102557

Sample

Accession:: GSM2740894

ID:: 302740894

SRA Run Selector

Select item 30274089311.

Organism:: Pectobacterium brasiliense PBR1692

Source name:: WT_in planta at 24

Platform:: GPL23900
Series:: GSE102557

Sample

Accession:: GSM2740893

ID:: 302740893

SRA Run Selector

Select item 30274089212.

Organism:: Pectobacterium brasiliense PBR1692

Source name:: WT_in planta at 24

Platform:: GPL23900
Series:: GSE102557

Sample

Accession:: GSM2740892

ID:: 302740892

SRA Run Selector

Select item 30274089113.

Organism:: Pectobacterium brasiliense PBR1692

Source name:: WT_In Vitro

Platform:: GPL23900
Series:: GSE102557

Sample

Accession:: GSM2740891

ID:: 302740891

SRA Run Selector

Select item 30274089014.

Organism:: Pectobacterium brasiliense PBR1692

Source name:: WT_In Vitro

Platform:: GPL23900
Series:: GSE102557

Sample

Accession:: GSM2740890

ID:: 302740890

SRA Run Selector

Supplemental Content

Filters: Manage Filters

Find related data

Search details

Important Links

Recent activity

Clear Turn Off Turn On

txid558269[Organism:noexp] (14)
GEO DataSets

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > Genes & Expression > Gene Expression Omnibus (GEO) Datasets