GEO DataSets

(Submitter supplied) Recognizably associated with oral infections, adverse pregnancy outcomes, and colorectal cancer, the Gram-negative oral bacterium Fusobacterium nucleatum is known to colonize many extraoral sites including placenta and colon. How this anaerobe copes with oxidative stress imposed by the host immune response in various tissues is unknown. Here, we revealed that F. nucleatum harbors a gene locus coding for a single, fused methionine sulfoxide reductase (MsrAB), a two-component transduction system (ModRS), thioredoxin (Trx)- and cytochrome c (CcdA)-like proteins. more...

Organism:

Fusobacterium nucleatum subsp. nucleatum

Type:

Expression profiling by high throughput sequencing

Platform:

GPL29799

12 Samples

Download data: XLSX

(Submitter supplied) A gram-negative colonizer of the oral cavity, Fusobacterium nucleatum not only interacts with many pathogens in the oral microbiome but also has the ability to spread to extraoral sites including placenta and amniotic fluid, promoting preterm birth. To date, however, the molecular mechanism of interspecies interactions –termed coaggregation–by F. nucleatum and how coaggregation affects bacterial virulence remain poorly defined. more...

Organism:

Fusobacterium nucleatum subsp. nucleatum

Type:

Expression profiling by high throughput sequencing

Platform:

GPL29799

6 Samples

Download data: XLSX

(Submitter supplied) We investigated an improved method that combines competitive PCR and microarray techniques. This approach allowed us to quantify specific bacterial groups mounted on DNA chips with accuracy close to that of real-time PCR, despite a measurement at the end point of PCR, and also to estimate the bacterial DNA content in sample DNA.

Organism:

Treponema denticola; Cereibacter sphaeroides; Streptococcus gordonii; Streptococcus agalactiae; Enterococcus faecalis; Bifidobacterium adolescentis; Homo sapiens; Prevotella intermedia; Prevotella nigrescens; Neisseria meningitidis; Porphyromonas gingivalis; Fusobacterium nucleatum; Clostridium beijerinckii; Lactobacillus gasseri; Tannerella forsythia; Campylobacter rectus; Helicobacter pylori; Pseudomonas aeruginosa; Aggregatibacter actinomycetemcomitans; Phocaeicola vulgatus; Capnocytophaga gingivalis; Deinococcus radiodurans; Streptococcus mutans; Streptococcus intermedius; Cutibacterium acnes; Bacteria; Acinetobacter baumannii; Escherichia coli; Staphylococcus aureus; Staphylococcus epidermidis; Bacillus cereus; Schaalia odontolytica; Fusobacterium nucleatum subsp. nucleatum

Type:

Other

Platform:

GPL25612

178 Samples

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(Submitter supplied) https://www.m-chemical.co.jp/en/products/departments/mcc/rd/product/1201266_7562.html

Organism:

Bacteria; Treponema denticola; Campylobacter rectus; Aggregatibacter actinomycetemcomitans; Porphyromonas gingivalis; Capnocytophaga gingivalis; Streptococcus gordonii; Streptococcus mutans; Streptococcus intermedius; Tannerella forsythia; Prevotella intermedia; Fusobacterium nucleatum subsp. nucleatum

1 Series

178 Samples

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