txid7897[Organism:noexp] - GEO DataSets - NCBI

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Select item 2001570851.

Diverse CGG binding proteins across eukaryotes produced by independent domestications of hAT transposons

(Submitter supplied) The human transcription factor (TF) CGGBP1 (“CGG Binding Protein”) is conserved only in amniotes, and is believed to derive from the zf-BED and Hermes transposase DNA-binding domains (DBDs) of a hAT DNA transposon. Here, we examine the DNA binding preferences of a wide variety of metazoan CGGBP1-like TFs with this bipartite domain using PBM experiments. The derived motifs are available at ...

Organism:: Aedes aegypti; Culex quinquefasciatus; Latimeria chalumnae; Cyprinus carpio; synthetic construct; Hucho hucho; Amphiprion ocellaris; Labeo rohita; Mola mola; Sphaeramia orbicularis; Anabarilius grahami; Petromyzon marinus; Acipenser ruthenus; Gallus gallus; Erpetoichthys calabaricus; Rhizophagus irregularis; Paramormyrops kingsleyae; Locusta migratoria; Crocodylus porosus; Homo sapiens; Rhodnius prolixus; Rhipicephalus appendiculatus; Kryptolebias marmoratus; Nematostella vectensis; Acanthochromis polyacanthus; Hippocampus comes; Hofstenia miamia; Acyrthosiphon pisum; Salmo salar; Fundulus heteroclitus; Sparus aurata; Chrysemys picta; Austrofundulus limnaeus; Anabas testudineus; Amphiprion percula; Salarias fasciatus

Type:: Other

Platform:: GPL11260
258 Samples

Download data: TXT

Series

Accession:: GSE157085

ID:: 200157085

PubMed Full text in PMC Similar studies

Select item 3047525282.

pTH15802.2_HK_8mer

Organism:: Latimeria chalumnae

Source name:: LCha_ENSLACP00000018055_H3B834_CGGBP1:0-167|X0D,HK design

Platform:: GPL11260
Series:: GSE157085

Download data: TXT

Sample

Accession:: GSM4752528

ID:: 304752528

Select item 3047525273.

pTH15802.1_ME_8mer

Organism:: Latimeria chalumnae

Source name:: LCha_ENSLACP00000018055_H3B834_CGGBP1:0-167|X0D,ME design

Platform:: GPL11260
Series:: GSE157085

Download data: TXT

Sample

Accession:: GSM4752527

ID:: 304752527

Select item 3047525264.

pTH15801.2_HK_8mer

Organism:: Latimeria chalumnae

Source name:: LCha_ENSLACP00000018055_H3B834_CGGBP1:0-167|X0N,HK design

Platform:: GPL11260
Series:: GSE157085

Download data: TXT

Sample

Accession:: GSM4752526

ID:: 304752526

Select item 3047525255.

pTH15801.1_ME_8mer

Organism:: Latimeria chalumnae

Source name:: LCha_ENSLACP00000018055_H3B834_CGGBP1:0-167|X0N,ME design

Platform:: GPL11260
Series:: GSE157085

Download data: TXT

Sample

Accession:: GSM4752525

ID:: 304752525

Select item 3047525246.

pTH15800.2_HK_8mer

Organism:: Latimeria chalumnae

Source name:: LCha_ENSLACP00000018055_H3B834_CGGBP1:0-167|X0H,HK design

Platform:: GPL11260
Series:: GSE157085

Download data: TXT

Sample

Accession:: GSM4752524

ID:: 304752524

Select item 3047525237.

pTH15800.1_ME_8mer

Organism:: Latimeria chalumnae

Source name:: LCha_ENSLACP00000018055_H3B834_CGGBP1:0-167|X0H,ME design

Platform:: GPL11260
Series:: GSE157085

Download data: TXT

Sample

Accession:: GSM4752523

ID:: 304752523

Select item 3047525228.

pTH15799.2_HK_8mer

Organism:: Latimeria chalumnae

Source name:: LCha_ENSLACP00000018055_H3B834_CGGBP1:0-167|X0Y,HK design

Platform:: GPL11260
Series:: GSE157085

Download data: TXT

Sample

Accession:: GSM4752522

ID:: 304752522

Select item 3047525219.

pTH15799.1_ME_8mer

Organism:: Latimeria chalumnae

Source name:: LCha_ENSLACP00000018055_H3B834_CGGBP1:0-167|X0Y,ME design

Platform:: GPL11260
Series:: GSE157085

Download data: TXT

Sample

Accession:: GSM4752521

ID:: 304752521

Select item 30475250010.

pTH15789.2_HK_8mer

Organism:: Latimeria chalumnae

Source name:: hAT-13_LCh_1p_Latimeria_chalumnae_repbase:0-213,HK design

Platform:: GPL11260
Series:: GSE157085

Download data: TXT

Sample

Accession:: GSM4752500

ID:: 304752500

Select item 30475249911.

pTH15789.1_ME_8mer

Organism:: Latimeria chalumnae

Source name:: hAT-13_LCh_1p_Latimeria_chalumnae_repbase:0-213,ME design

Platform:: GPL11260
Series:: GSE157085

Download data: TXT

Sample

Accession:: GSM4752499

ID:: 304752499

Select item 30475248512.

pTH15782.2_HK_8mer

Organism:: Latimeria chalumnae

Source name:: LCha_ENSLACP00000013808_H3AVY7_CGGBP1:0-205,HK design

Platform:: GPL11260
Series:: GSE157085

Download data: TXT

Sample

Accession:: GSM4752485

ID:: 304752485

Select item 30475248413.

pTH15782.1_ME_8mer

Organism:: Latimeria chalumnae

Source name:: LCha_ENSLACP00000013808_H3AVY7_CGGBP1:0-205,ME design

Platform:: GPL11260
Series:: GSE157085

Download data: TXT

Sample

Accession:: GSM4752484

ID:: 304752484

Select item 30475246214.

pTH15771.2_HK_8mer

Organism:: Latimeria chalumnae

Source name:: LCha_ENSLACP00000007346_H3ACH5_PTHR32344_SF1_CGGBP1:0-190,HK design

Platform:: GPL11260
Series:: GSE157085

Download data: TXT

Sample

Accession:: GSM4752462

ID:: 304752462

Select item 30475246115.

pTH15771.1_ME_8mer

Organism:: Latimeria chalumnae

Source name:: LCha_ENSLACP00000007346_H3ACH5_PTHR32344_SF1_CGGBP1:0-190,ME design

Platform:: GPL11260
Series:: GSE157085

Download data: TXT

Sample

Accession:: GSM4752461

ID:: 304752461

Select item 30475242516.

pTH15759.2_HK_8mer

Organism:: Latimeria chalumnae

Source name:: LCha_ENSLACP00000009796_H3AJH5_PTHR32344_SF1_CGGBP1:0-167,HK design

Platform:: GPL11260
Series:: GSE157085

Download data: TXT

Sample

Accession:: GSM4752425

ID:: 304752425

Select item 30475242417.

pTH15759.1_ME_8mer

Organism:: Latimeria chalumnae

Source name:: LCha_ENSLACP00000009796_H3AJH5_PTHR32344_SF1_CGGBP1:0-167,ME design

Platform:: GPL11260
Series:: GSE157085

Download data: TXT

Sample

Accession:: GSM4752424

ID:: 304752424

Select item 30475241618.

pTH15755.2_HK_8mer

Organism:: Latimeria chalumnae

Source name:: LCha_ENSLACP00000010284_H3AKW3_PTHR32344_SF1_CGGBP1:0-210,HK design

Platform:: GPL11260
Series:: GSE157085

Download data: TXT

Sample

Accession:: GSM4752416

ID:: 304752416

Select item 30475241519.

pTH15755.1_ME_8mer

Organism:: Latimeria chalumnae

Source name:: LCha_ENSLACP00000010284_H3AKW3_PTHR32344_SF1_CGGBP1:0-210,ME design

Platform:: GPL11260
Series:: GSE157085

Download data: TXT

Sample

Accession:: GSM4752415

ID:: 304752415

Select item 30475241420.

pTH15754.2_HK_8mer

Organism:: Latimeria chalumnae

Source name:: LCha_ENSLACP00000002540_H2ZYR9_PTHR32344_SF1_CGGBP1:0-172,HK design

Platform:: GPL11260
Series:: GSE157085

Download data: TXT

Sample

Accession:: GSM4752414

ID:: 304752414

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