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Items: 1 to 20 of 44

1.

Promoting in vivo Adult Liver Organ Growth with Bacteria without Fibrosis and Tumorigenesis

(Submitter supplied) Strategies that promote functional organ growth with minimal adverse effects are the ultimate goal of regenerative medicine but no single approach is currently available for organ level repair. Here, using an evolutionary adapted in vivo infection model - Mycobacterium leprae, with host cell reprogramming ability and its natural animal host, the nine-banded armadillo (Dasypus novemcinctus) that harbor bacteria in the highly regenerative liver - we present an in vivo model for promoting adult liver growth at organ level without adverse effects. more...
Organism:
Dasypus novemcinctus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL32766
12 Samples
Download data: TSV
Series
Accession:
GSE216223
ID:
200216223
2.

RNA-seq data of nine-banded armadillo uterus

(Submitter supplied) RNA-seq data of non-pregnant and peri-implantation stage nine-banded armadillo (Dasypus novemcinctus) uterus
Organism:
Dasypus novemcinctus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL22344
2 Samples
Download data: TXT
Series
Accession:
GSE120510
ID:
200120510
3.

A quantitative model for characterizing the evolutionary history of mammalian gene expression

(Submitter supplied) Characterizing the evolutionary history of a gene’s expression profile is a critical component for understanding the relationship between genotype, expression, and phenotype. However, it is not well-established how best to distinguish the different evolutionary forces acting on gene expression. Here, we use RNA-seq across 7 tissues from 17 mammalian species to show that expression evolution across mammals is accurately modeled by the Ornstein-Uhlenbeck (OU) process. more...
Organism:
Dasypus novemcinctus; Canis lupus familiaris; Mustela putorius furo; Monodelphis domestica; Oryctolagus cuniculus
Type:
Expression profiling by high throughput sequencing
5 related Platforms
33 Samples
Download data: TXT
Series
Accession:
GSE106077
ID:
200106077
4.

Evolution of Gene Expression in the Uterine Cervix related to Steroid Signaling: Conserved features in the regulation of cervical remodeling.

(Submitter supplied) The uterine cervix is the boundary structure between the uterus and the vagina and is a key component of the female reproductive tract for the maintenance of pregnancy and timing of parturition. Here we report on a comparative transcriptomic study of the cervix of four placental mammal species, mouse, guinea pig, rabbit and the basal eutherian mammal, armadillo, Dasypus novemcinctus, and one marsupial species, Monodelphis domestica. more...
Organism:
Dasypus novemcinctus; Oryctolagus cuniculus; Mus musculus; Monodelphis domestica
Type:
Expression profiling by high throughput sequencing
8 related Platforms
35 Samples
Download data: CSV
Series
Accession:
GSE85815
ID:
200085815
5.

Expression Profiling of Term Placenta in Viviparous Mammals by RNA-Seq

(Submitter supplied) The placenta is arguably the most anatomically variable organ in mammals. Understanding gene expression patterns among placentas from multiple species can illuminate the molecular basis of placenta function as well as potentially enrich our knowledge of the biology of obstetrical syndromes. We measured the expression profiles of the term placenta of multiple therian mammals using RNA-Seq. We identified multiple genes and transcripts which are differentially expressed across lineages including prolactin, relaxin, and galectins, as well as identifying the non-housekeeping genes which are core to placenta function (such as components of annexin complexes) in all species studied.
Organism:
Ateles fusciceps; Mus musculus; Dasypus novemcinctus; Pan paniscus; Canis lupus familiaris; Monodelphis domestica; Loxodonta africana; Bos taurus
Type:
Expression profiling by high throughput sequencing
8 related Platforms
8 Samples
Download data: FASTA, FPKM_TRACKING
Series
Accession:
GSE79121
ID:
200079121
6.

Gene expression profiling in the endometrium of pregnant mammals

(Submitter supplied) A major challenge in biology is to determine how evolutionarily novel characters originate, however, mechanistic explanations for the origin of novelties are almost completely unknown. The evolution of mammalian pregnancy is an excellent system in which to study the origin of novelties because extant mammals preserve major stages in the transition from egg-laying to live-birth. To determine the molecular bases of this transition, we characterized the pregnant/gravid uterine transcriptome from tetrapods, including species in the three major mammalian lineages, and used ancestral transcriptome reconstruction to trace the evolutionary history of uterine gene expression. more...
Organism:
Ornithorhynchus anatinus; Dasypus novemcinctus; Canis lupus familiaris
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL18702 GPL18701 GPL13923
3 Samples
Download data: TXT
Series
Accession:
GSE57714
ID:
200057714
7.

Transposon-mediated gene regulatory network rewiring contributed to the evolution of pregnancy in mammals

(Submitter supplied) We report the gene expression profile of human endometriual stromal cells and armadillo endometrial samples
Organism:
Monodelphis domestica; Dasypus novemcinctus; Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL9115 GPL13923 GPL17258
4 Samples
Download data: TXT
Series
Accession:
GSE30708
ID:
200030708
8.

Illumina NovaSeq 6000 (Dasypus novemcinctus)

Organism:
Dasypus novemcinctus
1 Series
12 Samples
Download data
Platform
Accession:
GPL32766
ID:
100032766
9.

Illumina NextSeq 500 (Dasypus novemcinctus)

Organism:
Dasypus novemcinctus
Download data
Platform
Accession:
GPL27905
ID:
100027905
10.

Illumina HiSeq 2500 (Dasypus novemcinctus)

Organism:
Dasypus novemcinctus
2 Series
3 Samples
Download data
Platform
Accession:
GPL22344
ID:
100022344
11.

Illumina HiSeq 2000 (Dasypus novemcinctus)

Organism:
Dasypus novemcinctus
2 Series
14 Samples
Download data
Platform
Accession:
GPL22343
ID:
100022343
12.

Illumina Genome Analyzer II (Dasypus novemcinctus)

Organism:
Dasypus novemcinctus
3 Series
3 Samples
Download data
Platform
Accession:
GPL13923
ID:
100013923
13.

ML infected liver, 30M, rep3

Organism:
Dasypus novemcinctus
Source name:
Liver
Platform:
GPL32766
Series:
GSE216223
Download data
Sample
Accession:
GSM6662015
ID:
306662015
14.

ML infected liver, 30M, rep2

Organism:
Dasypus novemcinctus
Source name:
Liver
Platform:
GPL32766
Series:
GSE216223
Download data
Sample
Accession:
GSM6662013
ID:
306662013
15.

ML infected liver, 30M, rep1

Organism:
Dasypus novemcinctus
Source name:
Liver
Platform:
GPL32766
Series:
GSE216223
Download data
Sample
Accession:
GSM6662012
ID:
306662012
16.

ML infected liver, 24M, rep3

Organism:
Dasypus novemcinctus
Source name:
Liver
Platform:
GPL32766
Series:
GSE216223
Download data
Sample
Accession:
GSM6662011
ID:
306662011
17.

ML infected liver, 24M, rep2

Organism:
Dasypus novemcinctus
Source name:
Liver
Platform:
GPL32766
Series:
GSE216223
Download data
Sample
Accession:
GSM6662010
ID:
306662010
18.

ML infected liver, 24M, rep1

Organism:
Dasypus novemcinctus
Source name:
Liver
Platform:
GPL32766
Series:
GSE216223
Download data
Sample
Accession:
GSM6662009
ID:
306662009
19.

Control liver, 30M, rep3

Organism:
Dasypus novemcinctus
Source name:
Liver
Platform:
GPL32766
Series:
GSE216223
Download data
Sample
Accession:
GSM6662008
ID:
306662008
20.

Control liver, 30M, rep2

Organism:
Dasypus novemcinctus
Source name:
Liver
Platform:
GPL32766
Series:
GSE216223
Download data
Sample
Accession:
GSM6662007
ID:
306662007
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