GEO DataSets

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Physcomitrium patens; Zea mays; Danio rerio; Macaca mulatta; Pan troglodytes; Pongo pygmaeus; Gallid alphaherpesvirus 2; Schmidtea mediterranea; Betapolyomavirus macacae; Arabidopsis thaliana; Sorghum bicolor; Caenorhabditis briggsae; Caenorhabditis elegans; Anopheles gambiae; Drosophila melanogaster; Drosophila pseudoobscura; Apis mellifera; Xenopus laevis; Xenopus tropicalis; Ateles geoffroyi; Gorilla gorilla; Bos taurus; Mus musculus; Rattus norvegicus; Human gammaherpesvirus 4; Human gammaherpesvirus 8; Macacine gammaherpesvirus 4; Saguinus labiatus; Tetraodon nigroviridis; Populus trichocarpa; Glycine max; Medicago truncatula; Gallus gallus; Pan paniscus; Ovis aries; Murid gammaherpesvirus 4; Oryza sativa; Saccharum officinarum; Bombyx mori; Lemur catta; Lagothrix lagotricha; Macaca nemestrina; Homo sapiens; Canis lupus familiaris; Sus scrofa; Human betaherpesvirus 5; Monodelphis domestica; Takifugu rubripes

Type:

Expression profiling by array; Non-coding RNA profiling by array

Platforms:

GPL10558 GPL6844

16 Samples

Download data: GPR

(Submitter supplied) Background: Similar to replicating myoblasts, many rhabdomyosarcoma cells express the myogenic determination gene MyoD. In contrast to myoblasts, rhabdomyosarcoma cells do not make the transition from a regulative growth phase to terminal differentiation. Previously we demonstrated that the forced expression of MyoD with its E-protein dimerization partner was sufficient to induce differentiation and suppress multiple growth-promoting genes, suggesting that the dimer was targeting a switch that regulated the transition from growth to differentiation. more...

Organism:

Arabidopsis thaliana; Oryza sativa; Saccharum officinarum; Caenorhabditis elegans; Anopheles gambiae; Apis mellifera; Danio rerio; Macaca mulatta; Gorilla gorilla; Pongo pygmaeus; Homo sapiens; Bos taurus; Gallid alphaherpesvirus 2; Macacine gammaherpesvirus 4; Tetraodon nigroviridis; Physcomitrium patens; Populus trichocarpa; Glycine max; Bombyx mori; Lemur catta; Lagothrix lagotricha; Pan troglodytes; Sus scrofa; Human betaherpesvirus 5; Betapolyomavirus macacae; Drosophila melanogaster; Drosophila pseudoobscura; Macaca nemestrina; Pan paniscus; Canis lupus familiaris; Ovis aries; Rattus norvegicus; Monodelphis domestica; Takifugu rubripes; Murid gammaherpesvirus 4; Medicago truncatula; Sorghum bicolor; Zea mays; Caenorhabditis briggsae; Xenopus laevis; Xenopus tropicalis; Gallus gallus; Ateles geoffroyi; Mus musculus; Human gammaherpesvirus 4; Human gammaherpesvirus 8; Saguinus labiatus; Schmidtea mediterranea

Type:

Non-coding RNA profiling by array

Platform:

GPL6844

4 Samples

Download data: GPR

(Submitter supplied) In animals, the maternal-to-embryonic transition (MET) is an important step occurring in the first days of early development. This important transition involves the degradation of maternal transcripts that have been stocked during oogenesis and used until this transition. Moreover, some precise and specific control mechanisms must govern the adequate synchronization of the MET events to promote embryonic genome activation. more...

Organism:

Lemur catta; Lagothrix; Macaca nemestrina; Canis lupus familiaris; Rhinopithecus bieti; Saguinus imperator; Pan troglodytes; Bos taurus; Ovis aries; Rattus norvegicus; Symphalangus syndactylus; Gorilla gorilla; Pongo abelii; Homo sapiens; Sus scrofa; Cricetulus griseus; Mus musculus; Ateles sp.; Macaca mulatta; Pan paniscus; Monodelphis domestica

Type:

Expression profiling by array

Platform:

GPL15194

1 Sample

Download data: TXT

(Submitter supplied) MicroRNAs (miRNAs) are small noncoding RNAs that negatively regulate gene expression post-transcriptionally. They play a critical role in developmental and physiological processes and have been implicated in the pathogenesis of several diseases including cancer. To identify miRNA signatures associated with different stages of neoplastic development, we examined the expression profile of 776 primate miRNAs in the following cells: primary African green monkey kidney (pAGMK) cells; spontaneously immortalized, non-tumorigenic, low-passage VERO cells (10-87 LP); tumorigenic, high-passage VERO cells (10-87 HP); and a cell line (10-87 T) derived from a 10-87 HP cell tumor xenograft in athymic nude mice. more...

Organism:

Chlorocebus aethiops; Macaca mulatta; Pan troglodytes; Pongo pygmaeus; Pan paniscus; Lemur catta; Lagothrix lagotricha; Macaca nemestrina; Homo sapiens; Ateles geoffroyi; Gorilla gorilla; Saguinus labiatus

Type:

Non-coding RNA profiling by array

Platform:

GPL10649

9 Samples

Download data: TXT

(Submitter supplied) catalog number : MRA-1031 Protocol: Arrays are made based on µParaflo microfluidic technology (Atactic Technologies). On the µParaflo microfluidic chip, each detection probe consists of a chemically modified nucleotide coding segment complementary to target microRNA (from miRBase, http://www.mirbase.org/) or other RNA (control or customer defined sequences) and a spacer segment of polyethylene glycol to extend the coding segment away from the substrate. more...

Organism:

Lemur catta; Saguinus imperator; Ateles sp.; Lagothrix; Macaca mulatta; Macaca nemestrina; Symphalangus syndactylus; Gorilla gorilla; Pan paniscus; Pan troglodytes; Pongo abelii; Homo sapiens; Canis lupus familiaris; Sus scrofa; Bos taurus; Ovis aries; Cricetulus griseus; Mus musculus; Rattus norvegicus; Monodelphis domestica; Rhinopithecus bieti

1 Series

1 Sample

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(Submitter supplied) Microarray assay was performed by LC Science Company. The microfluidic PicoArray reactor is made from silicon using standard microelectronic fabrication procedures. The reactor contains three topographical features: pico- reaction chambers, fluid microchannels, and inlet/outlet through holes. The chip contains 128 x 31 (total 3698) individual reaction chambers, each with an internal volume of 270 pl. more...

Organism:

Ornithorhynchus anatinus; Lemur catta; Saguinus imperator; Ateles sp.; Lagothrix; Macaca mulatta; Macaca nemestrina; Symphalangus syndactylus; Gorilla gorilla; Pan paniscus; Pan troglodytes; Pongo; Homo sapiens; Canis lupus familiaris; Equus caballus; Sus scrofa; Bos taurus; Ovis aries; Cricetulus griseus; Mus musculus; Rattus norvegicus; Monodelphis domestica; Rhinopithecus bieti

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(Submitter supplied) Primates miRNA microarray with 100% coverage of mature miRNAs listed in miRBase version 10.0 Protocol: Arrays are made based µParaflo microfluidic technology (Atactic Technologies). On the µParaflo microfluidic chip, each detection probe consists of a chemically modified nucleotide coding segment complementary to target microRNA (from miRBase, http://www.mirbase.org) or other RNA (control or customer defined sequences) and a spacer segment of polyethylene glycol to extend the coding segment away from the substrate. more...

Organism:

Lemur catta; Ateles geoffroyi; Lagothrix lagotricha; Macaca mulatta; Macaca nemestrina; Gorilla gorilla; Pan paniscus; Pan troglodytes; Pongo pygmaeus; Homo sapiens; Saguinus labiatus

1 Series

9 Samples

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(Submitter supplied) The array contains microRNA probes for multiple organisms annotated in the miRBase database (Release 8.1). Protocol: The multi-organism array was manufactured by spotting the contents of v8.1 of the miRCURY LNA Array ready to spot probe set from Exiqon onto glass microscope slides.

Organism:

Physcomitrium patens; Populus trichocarpa; Arabidopsis thaliana; Glycine max; Medicago truncatula; Oryza sativa; Saccharum officinarum; Sorghum bicolor; Zea mays; Caenorhabditis briggsae; Caenorhabditis elegans; Bombyx mori; Anopheles gambiae; Drosophila melanogaster; Drosophila pseudoobscura; Apis mellifera; Danio rerio; Xenopus laevis; Xenopus tropicalis; Gallus gallus; Lemur catta; Ateles geoffroyi; Lagothrix lagotricha; Macaca mulatta; Macaca nemestrina; Gorilla gorilla; Pan paniscus; Pan troglodytes; Pongo pygmaeus; Homo sapiens; Canis lupus familiaris; Sus scrofa; Bos taurus; Ovis aries; Mus musculus; Rattus norvegicus; Human betaherpesvirus 5; Human gammaherpesvirus 4; Gallid alphaherpesvirus 2; Monodelphis domestica; Takifugu rubripes; Murid gammaherpesvirus 4; Human gammaherpesvirus 8; Macacine gammaherpesvirus 4; Saguinus labiatus; Schmidtea mediterranea; Tetraodon nigroviridis; Betapolyomavirus macacae

2 Series

4 Samples

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