Similar studies for GEO DataSets (Select 200006418) - GEO DataSets

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Items: 20

Select item 2000064181.

RNAs associated with LARK in Drosophila pharate adult brain

(Submitter supplied) Circadian behaviors are regulated by intrinsic biological clocks consisting of central molecular oscillators and output pathways. Despite significant progress in elucidating the central timekeeping mechanisms, the molecular pathways coupling the circadian pacemaker to overt rhythmic behavior and physiology remain elusive. The Drosophila LARK RNA-binding protein is a candidate for such a coupling factor. more...

Organism:: Drosophila melanogaster

Type:: Expression profiling by array

Platform:: GPL72
4 Samples

Download data: CEL, EXP

Series

Accession:: GSE6418

ID:: 200006418

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000064202.

Effect of LARK overexpression in CNS neurons

(Submitter supplied) The goal of this study is to identify, in the head of adult flies, mRNA species whose expresson level are altered by overexpression of the Drosophila RNA-binding protein LARK in CNS neurons. Keywords: genetic modification, gene experssion profile

Organism:: Drosophila melanogaster

Type:: Expression profiling by array

Dataset:: GDS2553
Platform:: GPL72
6 Samples

Download data: CEL, EXP

Series

Accession:: GSE6420

ID:: 200006420

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 25533.

RNA-binding protein LARK overexpression effect on heads

Analysis of heads of animals overexpressing the RNA-binding protein LARK. Results provide insight into the identity of transcripts regulated by LARK in the neurons of the central nervous system.

Organism:: Drosophila melanogaster

Type:: Expression profiling by array, count, 2 protocol sets

Platform:: GPL72
Series:: GSE6420
6 Samples

Download data: CEL, EXP

DataSet

Accession:: GDS2553

ID:: 2553

PubMed Full text in PMC Similar studies GEO Profiles Analyze DataSet

Select item 2000075694.

Chromatin immunoprecipitation (ChIP) assay of CWO protein with Drosophila genome tiling array

(Submitter supplied) CWO binding sites were genome-widely searched with Drosophila genome tiling array. Abstract: The Drosophila circadian clock consists of integrated autoregulatory feedback loops, making the clock difficult to elucidate without comprehensively identifying the network components in vivo. Previous studies have adopted genome-wide screening for clock-controlled genes using high-density oligonucleotide arrays that identified hundreds of clock-controlled genes. more...

Organism:: Drosophila melanogaster

Type:: Genome binding/occupancy profiling by genome tiling array

Platform:: GPL3923
4 Samples

Download data: BED, CEL, ZIP

Series

Accession:: GSE7569

ID:: 200007569

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000083915.

Clockwork Orange is a transcriptional repressor and a new Drosophila circadian pacemaker component

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Drosophila melanogaster

Type:: Expression profiling by array

Platforms:: GPL1322 GPL72
45 Samples

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Series

Accession:: GSE8391

ID:: 200008391

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000076536.

S2 cells transfected with Clk

(Submitter supplied) S2 cells transfected with pAc-Clk or empty vector Keywords: S2 cells Clk

Organism:: Drosophila melanogaster

Type:: Expression profiling by array

Platform:: GPL1322
6 Samples

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Series

Accession:: GSE7653

ID:: 200007653

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000076527.

Timepoints Control strain

(Submitter supplied) 6 Timepoint microarray from control strain Keywords: Timepoints yw

Organism:: Drosophila melanogaster

Type:: Expression profiling by array

Platform:: GPL1322
10 Samples

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Series

Accession:: GSE7652

ID:: 200007652

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000076518.

Timepoints 5073 strain

(Submitter supplied) 6 Timepoints from 5073 strain Keywords: Timepoints 5073 cwo

Organism:: Drosophila melanogaster

Type:: Expression profiling by array

Platform:: GPL1322
9 Samples

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Series

Accession:: GSE7651

ID:: 200007651

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000076469.

CLK targets from fly heads

(Submitter supplied) CLK targets from fly heads using the TIM-GAL4; UAS-CLKGR line Keywords: CLK TARGETS

Organism:: Drosophila melanogaster

Type:: Expression profiling by array

Platforms:: GPL1322 GPL72
12 Samples

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Series

Accession:: GSE7646

ID:: 200007646

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 20000764410.

CLKGR in S2 cells

(Submitter supplied) Experiments performed in S2 cells to identify direct CLK targets Keywords: CLK targets

Organism:: Drosophila melanogaster

Type:: Expression profiling by array

Platforms:: GPL1322 GPL72
8 Samples

Download data

Series

Accession:: GSE7644

ID:: 200007644

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 20012010011.

Achilles-mediated and sex-specific regulation of circadian mRNA rhythms in Drosophila

(Submitter supplied) The circadian clock is an evolutionarily conserved mechanism that drives rhythmic expression of downstream genes. The core circadian clock drives the expression of clock-controlled genes either directly or indirectly, which in turn play critical roles in carrying out many rhythmic physiological processes. Nevertheless, the molecular mechanisms by which clock output genes orchestrate rhythmic signals from the brain to peripheral tissues are largely unknown. more...

Organism:: Drosophila melanogaster

Type:: Expression profiling by high throughput sequencing

Platform:: GPL21306
96 Samples

Download data: TXT

Series

Accession:: GSE120100

ID:: 200120100

PubMed Similar studies SRA Run Selector

Select item 20012848912.

RNA-sequencing of the adult female fly guts (w1118) with and without oral infection with Pseudomonas entomophila (Pe) or Erwinia carotovora carotovora 15 (Ecc15)

(Submitter supplied) Adult female Drosophila melanogaster flies from the w1118 background were fed sucrose, Pseudomonas entomophila (Pe), or Erwinia carotovora carotovora 15 (Ecc15).

Organism:: Drosophila melanogaster

Type:: Expression profiling by high throughput sequencing

Platform:: GPL19132
12 Samples

Download data: TXT

Series

Accession:: GSE128489

ID:: 200128489

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20012848813.

RNA-sequencing of the female adult fly guts with enterocyte-specific overexpression and silencing of lark in control and Pseudomonas entomophila infected states.

(Submitter supplied) The lark gene was either overexpressed or silenced in adult enterocytes. Flies were fed sucrose or Pseudomonas entomophila (Pe).

Organism:: Drosophila melanogaster

Type:: Expression profiling by high throughput sequencing

Platform:: GPL19132
18 Samples

Download data: TXT

Series

Accession:: GSE128488

ID:: 200128488

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20011862214.

Enteric infection induces extensive Lark-mediated 5' retention of exon-like introns in Drosophila

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Drosophila melanogaster

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing

Platforms:: GPL19132 GPL17275
112 Samples

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Series

Accession:: GSE118622

ID:: 200118622

PubMed Full text in PMC Similar studies

Select item 20011814515.

Genome-wide map of DNA Polymerase II binding in the adult Drosophila melanogaster gut in control and infected conditions

(Submitter supplied) In order to gain insight into gene regulation in the Drosophila gut following oral infection, we performed the genome-wide DNA Polymerase II binding data for Polymerase II in the fly gut.

Organism:: Drosophila melanogaster

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL17275
6 Samples

Download data

Series

Accession:: GSE118145

ID:: 200118145

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20011814216.

RNA-sequencing of the female adult fly guts from 38 DGRP lines with and without oral infection with Pseudomonas entomophila

(Submitter supplied) In order to gain insights into gut immunocompetence and its variation in a population, we performed RNA-sequencing of whole guts of 38 Drosophila Genetic Reference Panel strains.

Organism:: Drosophila melanogaster

Type:: Expression profiling by high throughput sequencing

Platform:: GPL17275
76 Samples

Download data: TXT

Series

Accession:: GSE118142

ID:: 200118142

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20000399017.

roX RNAs are required for up-regulation of male X chromosome in Drosophila.

(Submitter supplied) Drosophila males double transcription of their single X chromosome to equalize X-linked gene expression with females, which carry two X chromosomes. Increased transcription requires the Male-Specific Lethal (MSL) complex. One of the primary functions of the MSL complex is thought to be enrichment of H4Ac16 on the male X chromosome, a modification linked to elevated transcription. The roX1 and roX2 RNAs are essential but redundant components of the MSL complex. more...

Organism:: Drosophila melanogaster

Type:: Expression profiling by array

Dataset:: GDS2769
Platform:: GPL1322
6 Samples

Download data: CEL

Series

Accession:: GSE3990

ID:: 200003990

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 276918.

Non-coding roX1 and roX2 RNA deficiency effect on larvae

Analysis of third instar larvae lacking noncoding RNAs roX1 and roX2. The roX RNAs are components of the male-specific lethal (MSL) ribonucleoprotein complex, required for equalization of X:A expression levels in males. Results provide insight into the role of roX RNAs in X-chromosome expression.

Organism:: Drosophila melanogaster

Type:: Expression profiling by array, count, 2 genotype/variation sets

Platform:: GPL1322
Series:: GSE3990
6 Samples

Download data: CEL

DataSet

Accession:: GDS2769

ID:: 2769

PubMed Full text in PMC Similar studies GEO Profiles Analyze DataSet

Select item 20008073819.

Achilles is a circadian clock controlled gene that regulates innate immune function in Drosophila

(Submitter supplied) RNAseq transcriptional profiling of Drosophila heads from Achilles RNAi or control animals

Organism:: Drosophila melanogaster

Type:: Expression profiling by high throughput sequencing

Platform:: GPL16479
14 Samples

Download data: TXT, XLSX

Series

Accession:: GSE80738

ID:: 200080738

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20000045420.

Circadian rhythm in Clock mutant and Cry deficient mice

(Submitter supplied) Molecular analysis of circadian rhythm in mice. Liver tissue of wildtype, Clock mutant and Cry deficient C57BL/6 8- to 10-week-old male mice examined. Keywords = circadian rhythm Keywords: other