Similar studies for GEO DataSets (Select 200006450) - GEO DataSets

Select item 2000064501.

Genome-wide transcriptional plasticity underlies cellular adaptation to novel challenge

(Submitter supplied) Cells adjust their transcriptional state to accommodate environmental and genetic perturbations. An open question is to what extent transcriptional response to perturbations has been specifically selected along evolution. To test the possibility that transcriptional reprogramming does not need to be 'pre-designed' in order to lead to an adaptive metabolic state on physiological time scales, we confronted yeast cells with a novel challenge they had not previously encountered. more...

Organism:: Saccharomyces cerevisiae

Type:: Expression profiling by array

Platform:: GPL4625
22 Samples

Download data: GPR

Series

Accession:: GSE6450

ID:: 200006450

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000030212.

Six diploid strains grown in four conditions

(Submitter supplied) Six strains of Saccharomyces cerevisiae were grown in four different environments representing a continuum of rich and poor natural conditions Keywords: Stress response, genetic diversity

Organism:: Saccharomyces cerevisiae

Type:: Expression profiling by array

Platform:: GPL2682
91 Samples

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Series

Accession:: GSE3021

ID:: 200003021

Select item 2000000383.

BY_wild_parents

(Submitter supplied) Expression analysis of BY4716(isogenic to S288c) and a wild isolate collected by R. Mortimer. Each strain was grown in culture 6 independent times and RNA from each culture was isolated. Each of these RNA samples was subjected to a dye-swap pair of arrays (except the "RM11" sample, which only got one array). All arrays used the same pool of reference BY4716 sample. In sample titles, "BY" alone signifies the reference sample and all other strings represent independent cultures. more...

Organism:: Saccharomyces cerevisiae

Type:: Expression profiling by array

Datasets:: GDS93 GDS94
Platform:: GPL118
23 Samples

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Series

Accession:: GSE38

ID:: 200000038

Select item 2000000374.

BYxwild_40

(Submitter supplied) Expression analysis of F1 haploid segregants from a cross between BY4716 (isogenic to S288c) and a wild isolate collected by R. Mortimer. Each segregant sample was subjected to a dye-swap pair of arrays. All arrays used the same pool of reference BY4716 sample. In sample titles, "BY" alone signifies the reference sample and all other strings represent segregants. All sample titles are of the form S1-S2. more...

Organism:: Saccharomyces cerevisiae

Type:: Expression profiling by array

Datasets:: GDS91 GDS92
Platform:: GPL118
80 Samples

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Series

Accession:: GSE37

ID:: 200000037

Select item 945.

Transcriptional regulation (II)(dye-swap)

Genetic linkage analysis of global expression levels in a cross between two budding yeast strains. Identification of cis-acting and trans-acting loci that modulate a total of 570 genes.

Organism:: Saccharomyces cerevisiae

Type:: Expression profiling by array, log ratio, 2 strain sets

Platform:: GPL118
Series:: GSE38
11 Samples

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DataSet

Accession:: GDS94

ID:: 94

Select item 936.

Transcriptional regulation (II)

Genetic linkage analysis of global expression levels in a cross between two budding yeast strains. Identification of cis-acting and trans-acting loci that modulate a total of 570 genes.

Organism:: Saccharomyces cerevisiae

Type:: Expression profiling by array, log ratio, 2 strain sets

Platform:: GPL118
Series:: GSE38
12 Samples

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DataSet

Accession:: GDS93

ID:: 93

Select item 927.

Transcriptional regulation (I)(dye-swap)

Genetic linkage analysis of global expression levels in a cross between two budding yeast strains. Identification of cis-acting and trans-acting loci that modulate a total of 570 genes.

Organism:: Saccharomyces cerevisiae

Type:: Expression profiling by array, log ratio, 7 other sets

Platform:: GPL118
Series:: GSE37
40 Samples

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DataSet

Accession:: GDS92

ID:: 92

Select item 918.

Transcriptional regulation (I)

Genetic linkage analysis of global expression levels in a cross between two budding yeast strains. Identification of cis-acting and trans-acting loci that modulate a total of 570 genes.

Organism:: Saccharomyces cerevisiae

Type:: Expression profiling by array, log ratio, 7 other sets

Platform:: GPL118
Series:: GSE37
40 Samples

Download data

DataSet

Accession:: GDS91

ID:: 91

Select item 2000557199.

Transcriptome reorganization of gene-rewired Escherichia coli cells in response to histidine depletion

(Submitter supplied) An assortment of genetically engineered Escherichia coli strains of the rewired gene regulation were used to study whether the cells could adapt to the environmental changes without the evolved gene regulatory machinaries. These E. coli strains had a synthetic gene circuit comprising a rewried gene that natively located within the His opeon. The cells growing under histidine supplied or depleted conditions were subjected to the macrioarray analysis. more...

Organism:: Escherichia coli

Type:: Expression profiling by genome tiling array

Platform:: GPL13336
90 Samples

Download data: CEL, TXT

Series

Accession:: GSE55719

ID:: 200055719

PubMed Full text in PMC Similar studies

Select item 20003005310.

Dynamics of two oscillation phenotypes in S. cerevisiae reveal a network of genome-wide transcriptional and cell cycle oscillators.

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Schizosaccharomyces pombe; Saccharomyces cerevisiae

Type:: Expression profiling by array

Platform:: GPL2529
81 Samples

Download data: CEL

Series

Accession:: GSE30053

ID:: 200030053

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 20003005211.

Dynamics of two oscillation phenotypes in S. cerevisiae [4hr]

(Submitter supplied) Genetic and environmental factors influence the phenotype of an organism. Time is rarely considered when studying changes in cellular phenotype. Time-resolved microarray data revealed genome-wide transcriptional changes in cells oscillating with ~2 and ~4 h periods. We mapped the global patterns of transcriptional oscillations into a 3-dimensional map to represent different cellular phenotypes of oscillation period. more...