GEO DataSets

(Submitter supplied) Whole brain gene expression profiling for Julidochromis transcriptus male vs. female and Julidochromis marlieri male vs female to identify sex-role biased and sex biased gene expression in these species that exhibit conventional and reversed sex-biased behavior respectively.

Organism:

Haplochromis burtoni; Julidochromis marlieri; Julidochromis transcriptus

Type:

Expression profiling by array

Platform:

GPL6416

20 Samples

Download data: GPR

(Submitter supplied) Throughout the animal kingdom, we know many examples of mating system evolution that exemplify adaptive responses to changes in the environment, yet our understanding of the accompanying neural and molecular mechanisms that give rise to such behavioral changes remains understudied. In the present study we aimed to define the molecular basis of interspecific variation in social organization in Ectodini cichlids from Lake Tanganyika. more...

Organism:

Haplochromis burtoni; Xenotilapia tenuidentata; Xenotilapia flavipinnis; Xenotilapia leptura; Xenotilapia ochrogenys

Type:

Expression profiling by array

Platform:

GPL6416

54 Samples

Download data: GPR

(Submitter supplied) Most behaviors are associated with heritable genetic variation. Genetic mapping has revealed genomic regions or, in a few cases, specific genes explaining part of this variation. However, understanding how genetic divergence shapes behavioral evolution remains unclear. Here we analyze the evolution of an innate extended phenotype: bower building among male cichlid fish of Lake Malawi, which build bowers of two types, pits and castles. more...

Organism:

Copadichromis virginalis x Mchenga conophoros

Type:

Expression profiling by high throughput sequencing

Platform:

GPL23266

6 Samples

Download data: TXT

(Submitter supplied) the goal of this experiment is to identify the molecular modules that underlie social phenotypes in A. burtoni Keywords: loop design comparison of dominant (T) subordinate (NT) and brooding female (F) phenotypes 6 individuals of each phenotype under normal mixed population conditions

Organism:

Haplochromis burtoni

Type:

Expression profiling by array

Platform:

GPL928

40 Samples

Download data: GPR

(Submitter supplied) Purpose: The goal of this study is to identify genes that showed a pattern of differential expression between species within activated neurons during mirror-elicited aggression between two species of Lake Malawi cichlid fish which differ in aggressive behaviors, Mchenga conophoros (MC, sand-dwelling) and Petrotilapia chitimba (PC, rock-dwelling). To do this, we use antibodies to phosphorylated ribosomal protein S6 (pS6) to enrich for transcripts bound to phosphorylated ribosomes followed by RNA-seq (PhosphoTRAP). more...

Organism:

Mchenga conophoros; Petrotilapia sp. 'chitimba'

Type:

Expression profiling by high throughput sequencing

Platforms:

GPL27797 GPL27776

16 Samples

Download data: CSV, TXT

(Submitter supplied) Fish and Chips: Expression Profiling in Non-traditional Model Systems Using a Cichlid Fish cDNA Microarray This series represents the 26 arrays that went into Renn et al 2004 (submitted January 16th), and one additional hybridization (GSM15240) that was not included in the publication analysis for statistical reasons. Keywords: other

Organism:

Danio rerio; Xiphophorus; Haplochromis burtoni; Neolamprologus brichardi; Xenotilapia melanogenys; Salmo salar; Poecilia reticulata; Oreochromis niloticus

Type:

Expression profiling by array

Platform:

GPL928

27 Samples

Download data

(Submitter supplied) To identify the transcriptome divergence and sex roles underlying it in recently diverged Drosophia pseudoobscura group, we compare the global gene expression of 7-day-old whole body adults of pure species.

Organism:

Drosophila pseudoobscura; Drosophila pseudoobscura bogotana; Drosophila persimilis

Type:

Expression profiling by array

Platform:

GPL8884

18 Samples

Download data: GPR

(Submitter supplied) A microarray study of sex- and gonad-biased gene expression was conducted to determine whether zebrafish demonstrate male-specific patterns consistent with those observed in other animals. We identified a large number of genes (5899) demonstrating statistical differences in transcript abundance between male and female Danio rerio. All sex-biases in gene expression were due to differences between testis and ovary, although differences between male and female body likely went undetected due to constraints imposed by study design and statistical criteria. more...

Organism:

Danio rerio

Type:

Expression profiling by array

Platform:

GPL1319

12 Samples

Download data: CEL

(Submitter supplied) We use a custom microarray for the crustacean Daphnia pulex to investigate gene expression in males, juvenile females and pregnant females. Keywords: sex-biased, developmental

Organism:

Daphnia pulex

Type:

Expression profiling by array

Platform:

GPL4349

8 Samples

Download data: GPR

(Submitter supplied) We investigated the transcriptomic response to territorial intrusion in four regions of the brain (telencephalon, diencephalon, cerebellum and brain stem) of a teleost fish, the threespined stickleback (Gasterosteus aculeatus). We tested the hypothesis that gene regulatory networks modulate the transcriptional response to territorial intrusion in the different brain regions and thereby aggressive behavior. more...

Organism:

Gasterosteus aculeatus

Type:

Expression profiling by array

Platform:

GPL14730

19 Samples

Download data: GPR

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Drosophila simulans; Drosophila yakuba; Drosophila melanogaster

Type:

Genome binding/occupancy profiling by genome tiling array; Expression profiling by array; Expression profiling by high throughput sequencing

5 related Platforms

32 Samples

Download data: BAR, CEL, TXT

(Submitter supplied) We performed mRNA-seq of dissected testes of multiple Drosophila species and RNAi animals

Organism:

Drosophila simulans; Drosophila melanogaster; Drosophila yakuba

Type:

Expression profiling by high throughput sequencing

Platforms:

GPL9058 GPL11000 GPL9394

8 Samples

Download data: TXT

(Submitter supplied) Constitutive knockdown of Zeus gene and expression profiling of male wholebody and reproductive organs

Organism:

Drosophila melanogaster

Type:

Expression profiling by array

Platform:

GPL6385

22 Samples

Download data: TXT

(Submitter supplied) Zeus Caf40 ChIP-chip with FLAG tag in D. melanogaster adult flies

Organism:

Drosophila melanogaster

Type:

Genome binding/occupancy profiling by genome tiling array

Platform:

GPL11397

2 Samples

Download data: BAR, CEL