Similar studies for GEO DataSets (Select 200080456) - GEO DataSets

(Submitter supplied) Employ affinity purification approach to capture different stages of glial-specific information on gene expression, nucleosome occupancy and histone modifications (HMs) in Drosophila melanogaster embryo

Organism:: Drosophila melanogaster

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL13304
12 Samples

Download data: BED, BW

Series

Accession:: GSE83376

ID:: 200083376

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2000833754.

Dynamic regulation of chromatin signatures during Drosophila embryonic glial differentiation [RNA-Seq]

(Submitter supplied) Expression profiles of affinity-purified nuclei of GBs and glias from the Drosophila embryos.

Organism:: Drosophila melanogaster

Type:: Expression profiling by high throughput sequencing

Platform:: GPL13304
2 Samples

Download data: TXT

Series

Accession:: GSE83375

ID:: 200083375

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2000804585.

Chromatin remodeling during in vivo neural stem cells differentiating to neurons in early Drosophila embryos

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Drosophila melanogaster

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL13304
14 Samples

Download data: BED, BW, TXT

Series

Accession:: GSE80458

ID:: 200080458

PubMed Full text in PMC Similar studies

Select item 2000804576.

Chromatin remodeling during in vivo neural stem cells differentiating to neurons in early Drosophila embryos [ChIP-seq]

(Submitter supplied) Chromatin profiling of affinity-purified nuclei of neural stem cells (NSCs) and neurons from the Drosophila embryos, respectively.

Organism:: Drosophila melanogaster

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL13304
12 Samples

Download data: BED, BW, TXT

Series

Accession:: GSE80457

ID:: 200080457

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2000467937.

An epigenetic signature of developmental potential in neural stem cells and early neurons

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Mus musculus

Type:: Expression profiling by array; Genome binding/occupancy profiling by high throughput sequencing

Platforms:: GPL9185 GPL6885
14 Samples

Download data: BED, CSV

Series

Accession:: GSE46793

ID:: 200046793

Select item 2000467928.

An epigenetic signature of developmental potential in neural stem cells and early neurons [ChIP-seq]

(Submitter supplied) A cardinal property of neural stem cells (NSCs) is their ability to adopt multiple fates upon differentiation. The epigenome is widely seen as a read-out of cellular potential and a manifestation of this can be seen in embryonic stem cells (ESCs), where promoters of many lineage-specific regulators are marked by a bivalent epigenetic signature comprising trimethylation of both lysine 4 and lysine 27 of histone H3 (H3K4me3 and H3K27me3, respectively). more...

Organism:: Mus musculus

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL9185
6 Samples

Download data: BED, CSV

Series

Accession:: GSE46792

ID:: 200046792

PubMed Similar studies SRA Run Selector

Select item 2000467919.

An epigenetic signature of developmental potential in neural stem cells and early neurons [expression]

Organism:: Mus musculus

Type:: Expression profiling by array

Platform:: GPL6885
8 Samples

Download data: TXT

Series

Accession:: GSE46791

ID:: 200046791

Select item 20007608410.

Genome-wide maps of chromatin state during the differentiation of hESC into hNECs

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL11154
12 Samples

Download data: TXT

Series

Accession:: GSE76084

ID:: 200076084

PubMed Full text in PMC Similar studies

Select item 20007608311.

Genome-wide maps of chromatin state during the differentiation of hESC into hNECs (MNase-Seq)

(Submitter supplied) To study the epigenetic regulation during neuroectoderm specification process, we generated in-depth maps of nucleosome and histone modifications.We found that the depletion of nucleosome marked with H2A.Z in promoter regions contributes to the activation of key neuroectoderm related genes as providing open chromatin state for Pol II binding. Meanwhile, HMs undergo active remodeling with recruiting key transcription factors.So our study provided a full view on the transcriptional regulation of epigenome during neuroectoderm specification.

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL11154
2 Samples

Download data: TXT

Series

Accession:: GSE76083

ID:: 200076083

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20007608212.

Genome-wide maps of chromatin state during the differentiation of hESC into hNECs (ChIP-Seq)

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL11154
10 Samples

Download data: TXT

Series

Accession:: GSE76082

ID:: 200076082

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20010133013.

Dynamic placement of the linker histone H1 regulates nucleosome arrangement and coordinates gene transcription in early Drosophila embryos

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Drosophila melanogaster

Type:: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing

Platform:: GPL13304
7 Samples

Download data: FPKM_TRACKING, TAB, TDF

Series

Accession:: GSE101330

ID:: 200101330

PubMed Full text in PMC Similar studies

Select item 20010132814.

Dynamic placement of the linker histone H1 regulates nucleosome arrangement and coordinates gene transcription in early Drosophila embryos[RNA-Seq]

(Submitter supplied) Expression profiles of in after egg laying (AEL) 3-4 hours (hr) and 14-15hr Drosophila melanogaster embryos (W1118)

Organism:: Drosophila melanogaster

Type:: Expression profiling by high throughput sequencing

Platform:: GPL13304
1 Sample

Download data: FPKM_TRACKING

Series

Accession:: GSE101328

ID:: 200101328

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20010132715.

Dynamic placement of the linker histone H1 regulates nucleosome arrangement and coordinates gene transcription in early Drosophila embryos[ChIP-Seq]

(Submitter supplied) H1 ChIP-seq profiling and nucleosome MNase-seq profiling were performed in after egg laying (AEL) 3-4 hours (hr) and 14-15hr Drosophila melanogaster embryos (W1118).

Organism:: Drosophila melanogaster

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL13304
6 Samples

Download data: TAB, TDF

Series

Accession:: GSE101327

ID:: 200101327

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 20007872516.

Transcriptional Regulationand Chromatin Dynamics inHuman Epithelial Cell Differentiation (RNA-seq)

(Submitter supplied) Transcriptional profiling of KP and DK through RNA-seq

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platform:: GPL18573
6 Samples

Download data: TXT

Series

Accession:: GSE78725

ID:: 200078725

PubMed Full text in PMC Similar studies Analyze with GEO2R SRA Run Selector

Select item 20006432817.

Transcriptional Regulationand Chromatin Dynamics inHuman Epithelial Cell Differentiation

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens

Type:: Expression profiling by array; Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing