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Links from GEO DataSets

Items: 8

1.

Metabolic reprogramming of macrophage polarization by creatine [RNA-seq]

(Submitter supplied) We found that the creatine metabolic pathway was differentially regulated under M1 versus M2 polarizing conditions. In return, creatine could suppress M1 by blocking STAT1 tyrosine phosphorylation while promote M2 by sustaining chromatin accessibility of specific gene loci.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL23479
8 Samples
Download data: TXT
Series
Accession:
GSE110395
ID:
200110395
2.

Metabolic reprogramming of macrophage polarization by creatine

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL23479 GPL13112
12 Samples
Download data: BED, TXT, WIG
Series
Accession:
GSE110456
ID:
200110456
3.

Metabolic reprogramming of macrophage polarization by creatine [ATAC-seq]

(Submitter supplied) We found that the creatine metabolic pathway was differentially regulated under M1 versus M2 polarizing conditions. In return, creatine could suppress M1 by blocking STAT1 tyrosine phosphorylation while promote M2 by sustaining chromatin accessibility of specific gene loci.
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL13112
4 Samples
Download data: BED, WIG
Series
Accession:
GSE110403
ID:
200110403
4.

Immunoproteasome dysfunction augments alternative polarization of alveolar macrophages

(Submitter supplied) The proteasome is a central regulatory hub for intracellular signaling by degrading numerous signaling mediators. Immunoproteasomes are specialized types of proteasomes known to be involved in shaping adaptive immune responses, but their role for innate immune signaling is elusive. Here, we analyzed immunoproteasome function for polarization of alveolar macrophages which are highly specialized tissue macrophages of the alveolar surface of the lung. more...
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL6885
12 Samples
Download data: TXT
Series
Accession:
GSE72000
ID:
200072000
5.

Opposing macrophage-polarization programs show extensive epigenomic and transcriptional cross-talk

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL9250 GPL13112
80 Samples
Download data: BED, NARROWPEAK, TXT
Series
Accession:
GSE84520
ID:
200084520
6.

Opposing macrophage-polarization programs show extensive epigenomic and transcriptional cross-talk [ChIP_broadly]

(Submitter supplied) The M1 and the M2 macrophage polarization programs (activated by IFNγ and IL-4, respectively) lie at the opposite edges of a continuum of activation states but are frequently co-activated during co-infections and in cancer despite controlling divergent functional responses. Whether these two programs are mutually exclusive, how they influence each other, and whether one represents the prevailing response, are all open questions. more...
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL9250
13 Samples
Download data: BED, TXT
Series
Accession:
GSE84519
ID:
200084519
7.

Opposing macrophage-polarization programs show extensive epigenomic and transcriptional cross-talk [ChIP_narrow]

(Submitter supplied) The M1 and the M2 macrophage polarization programs (activated by IFNγ and IL-4, respectively) lie at the opposite edges of a continuum of activation states but are frequently co-activated during co-infections and in cancer despite controlling divergent functional responses. Whether these two programs are mutually exclusive, how they influence each other, and whether one represents the prevailing response, are all open questions. more...
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL9250
22 Samples
Download data: BED, NARROWPEAK
Series
Accession:
GSE84518
ID:
200084518
8.

Opposing macrophage-polarization programs show extensive epigenomic and transcriptional cross-talk [RNA-Seq]

(Submitter supplied) The M1 and the M2 macrophage polarization programs (activated by IFNγ and IL-4, respectively) lie at the opposite edges of a continuum of activation states but are frequently co-activated during co-infections and in cancer despite controlling divergent functional responses. Whether these two programs are mutually exclusive, how they influence each other, and whether one represents the prevailing response, are all open questions. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL13112
45 Samples
Download data: TXT, XLS
Series
Accession:
GSE84517
ID:
200084517
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Supplemental Content

db=gds|term=|query=1|qty=2|blobid=MCID_662a7ecaf43648671568acb9|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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