GEO DataSets

(Submitter supplied) Overall, we conclude that single cell RNA‐seq analysis in this embryo is revealing of the cell types present during development, of the changes in the gene regulatory network resulting from inhibition of various signaling pathways, and of the selectivity of these pathways in influencing developmental trajectories.

Organism:

Strongylocentrotus purpuratus

Type:

Expression profiling by high throughput sequencing

Platform:

GPL20965

3 Samples

Download data: TXT

(Submitter supplied) Here we leverage the sea urchin embryo for its rich history of developmental transitions, its well-established gene regulatory network, and the ability to readily dissociate embryos into single cells to interrogate the embryo by single cell RNA-seq. We tested eight developmental stages in S. purpuratus, from the eight-cell stage to late in gastrulation. The analysis revealed cell types derived from the abundant cells of the three germ layers as well as the rare cells of the germline. more...

Organism:

Strongylocentrotus purpuratus

Type:

Expression profiling by high throughput sequencing

Platform:

GPL28450

8 Samples

Download data: MTX, RDS, TSV