Similar studies for GEO DataSets (Select 200137695) - GEO DataSets

Select item 2001376951.

Characterization of small RNAs in the different developmental stages of carcinogenic parasite-Clonorchis sinensis

(Submitter supplied) Clonorchiasis is a foodborne zoonotic disease caused by Clonorchis sinensis which belongs to trematodes with a complex lifecycle, there are increasing evidences that small RNAs including microRNAs and PIWI-interacting RNAs can participate in regulation of embryonic development. However, there is little information about the small RNAs in the different developmental stages of C. sinensis. In the present study, we investigated profiles of miRNAs and piRNAs in the different developmental stages including eggs, metacercaria and adults of C. more...

Organism:: Clonorchis sinensis

Type:: Non-coding RNA profiling by high throughput sequencing

Platform:: GPL27485
4 Samples

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Series

Accession:: GSE137695

ID:: 200137695

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Select item 2000748722.

Circulating let-7 levels in plasma correlate with hepatic fibrosis progression in chronic hepatitis C

(Submitter supplied) Circulating microRNAs show great promise as novel noninvasive markers for the state of disease progression in chronic hepatitis C (CHC). We performed circulating miRNA expression analysis to identify circulating miRNAs associated with disease progression in the natural course of chronic HCV infection using a prospectively followed and well-characterized HCV-infected blood donor cohort.

Organism:: synthetic construct; Homo sapiens

Type:: Non-coding RNA profiling by array

Platform:: GPL19117
48 Samples

Download data: CEL

Series

Accession:: GSE74872

ID:: 200074872

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Select item 2001747103.

Transfer of small RNA from extracellular vesicles secreted by primary human airway epithelial cells to Pseudomonas aeruginosa

(Submitter supplied) P. aeruginosa were exposed to extracellular vesicles (EVs) secreted by primary human airway epithelial cells from 3 donors or PBS vehicle control for 6 h. Total RNA was isolated, small RNA libraries were prepared with the QIAseq smRNA kit (Qiagen) and 75-bp single-end reads were generated using Illumina MiniSeq. To assess transfer of human EV small RNAs to P. aeruginosa, sequences that did not map to the PA14 reference genome were aligned to the human genome.

Organism:: Pseudomonas aeruginosa

Type:: Expression profiling by high throughput sequencing

Platform:: GPL30167
6 Samples

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Series

Accession:: GSE174710

ID:: 200174710

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Select item 2001746904.

small RNAseq of extracellular vesicles secreted by primary human airway epithelial cells

(Submitter supplied) Characterization of the small RNA content of extracellular vesicles isolated from cell culture supernatants of primary human airway epithelial cells from 3 donors.

Organism:: Homo sapiens

Type:: Non-coding RNA profiling by high throughput sequencing

Platform:: GPL18573
3 Samples

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Series

Accession:: GSE174690

ID:: 200174690

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Select item 2000460855.

miRNA in mouse macrophages

(Submitter supplied) By employing miRCURY LNA™ microRNA Array, we have identified a subset of 21 top miRNAs that are differentially expressed between GM-BMM and M-BMM cells

Organism:: Mus musculus; Human gammaherpesvirus 8; Homo sapiens; Human betaherpesvirus 5; Murid betaherpesvirus 1; Human immunodeficiency virus 1; Merkel cell polyomavirus; Rattus norvegicus; Human alphaherpesvirus 2; JC polyomavirus; Murid gammaherpesvirus 4; Betapolyomavirus hominis; Human alphaherpesvirus 1; human gammaherpesvirus 4; Mus musculus cytomegalovirus 2; Betapolyomavirus macacae