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Links from GEO DataSets

Items: 6

1.

Transcriptome comparison of wild-type and tnnt2a MO zebrafish hearts

(Submitter supplied) We performed RNA-seq analyses to characterize transcriptomic changes in non-beating tnnt2a morphant compared to wild-type hearts.
Organism:
Danio rerio
Type:
Expression profiling by high throughput sequencing
Platform:
GPL20828
6 Samples
Download data: XLSX
Series
Accession:
GSE151398
ID:
200151398
2.

Analysis of gene expression during the early stages of zebrafish heart valve development

(Submitter supplied) We report changes in the levels of gene expression between 48hpf hearts and 56hpf hearts, the initial stages of valvulogenesis
Organism:
Danio rerio
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18413
6 Samples
Download data: TXT
Series
Accession:
GSE79585
ID:
200079585
3.

Regulation of cardiac cushion endocardial cells by KLF2

(Submitter supplied) Comparison of differential gene expression between controls and mice that lack the transciption factor KLF2 from the cardiac endocardium following Nfatc1 Cre deletion.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL17021
8 Samples
Download data: CSV
Series
Accession:
GSE80964
ID:
200080964
4.

Sequential ligand-dependent Notch signaling activation regulates valve primordium formation and morphogenesis

(Submitter supplied) Our studies identify a mechanism of signaling crosstalk during valve morphogenesis that sheds light on the origin of congenital heart defects associated with reduced Notch function.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL11002
16 Samples
Download data: TXT
Series
Accession:
GSE74556
ID:
200074556
5.

Injury-activated endocardium plays structural and signalling roles in zebrafish heart regeneration

(Submitter supplied) The zebrafish heart remarkably regenerates after a severe ventricular damage followed by inflammation, fibrotic tissue deposition and removal concomitant with cardiac muscle replacement. We have investigated the role of the endocardium in this regeneration process. 3D-whole mount imaging in injured hearts revealed that GFP-labelled endocardial cells in ET33mi-60A transgenic fish become rapidly activated and highly proliferative at 3 days post cryoinjury (dpci). more...
Organism:
Danio rerio
Type:
Expression profiling by high throughput sequencing
Platform:
GPL15583
6 Samples
Download data: CSV
Series
Accession:
GSE68650
ID:
200068650
6.

Transcriptome analysis of the role of SMAD6 in mediating endothelial cell response to laminar shear stress by high throughput RNA sequencing

(Submitter supplied) Laminar shear stress regulates blood vessel morphogenesis and subsequent quiescence, but how endothelial cells (EC) enact and maintain the vascular homeostasis required in most vessels for proper vessel function is poorly understood. SMAD6, a scaffold for several signaling pathways, is expressed in developing arteries and its expression is flow-regulated. We found that SMAD6 is essential for endothelial cell flow-mediated responses, and that it functions downstream of the mechanosensor Notch1. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL20301
8 Samples
Download data: XLSX
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