GEO DataSets

(Submitter supplied) To identify genes relevant to cold tolerance and the process of overwintering, we sequenced the transcriptomes of wintering and non-wintering adult and larval D. valens using the Illumina HiSeq platform. Differential expression analysis methods for other non-model organisms were used to compare transcript abundances in adults and larvae at two time periods, followed by the identification of functions and metabolic pathways related to genes associated with cold tolerance. more...

Organism:

Dendroctonus valens

Type:

Expression profiling by high throughput sequencing

Platform:

GPL29012

12 Samples

Download data: FASTA, TXT

(Submitter supplied) The most common ladybird beetle, Coccinella septempunctata L., is an excellent predator of crop pests such as aphids and white flies, and it shows a wide range of adaptability, a large appetite and a high reproductive ability. In this study, we collected female adults in three different states, i.e., non-diapause, diapause and diapause termination, for transcriptome sequencing.

Organism:

Coccinella septempunctata

Type:

Expression profiling by high throughput sequencing

Platform:

GPL21201

3 Samples

Download data: FA, TXT

(Submitter supplied) By comparing transcriptome profiles for differential gene expression, genes and pathways probably involved in insect cold hardinesswere identified. This dataset provides a global transcriptome data and differential transcriptome comparisons in E. hippophaecolus under cold stress. This may facilitate future genomic studies aimed at improving our understanding of the molecular mechanisms underlying the response of insects to low temperatures.

Organism:

Eogystia hippophaecolus

Type:

Expression profiling by high throughput sequencing

Platform:

GPL22826

5 Samples

Download data: FA, TXT

(Submitter supplied) To investigate the expression profile of three different developental stages of zebrafish embryos, we then performed gene expression profiling analysis using data obtained from RNA-seq of 3 different developmental of zebrafish embryos.

Organism:

Danio rerio

Type:

Expression profiling by high throughput sequencing

Platform:

GPL18413

6 Samples

Download data: TXT