GEO DataSets

(Submitter supplied) To investigate the virological properties of a SARS-CoV-2 variant, Omicron BA.2, we generated chimeric recombinant viruses that express GFP and encodes the S gene of B.1.1 (ancestral D614G-bearing virus), Delta, BA.1 and BA.2. To verify the genome sequence of the working viruses, we performed viral RNA-sequencing of the viral stock.

Organism:

Severe acute respiratory syndrome coronavirus 2

Type:

Other

Platform:

GPL28866

4 Samples

Download data: TXT

(Submitter supplied) To investigate the virological properties of SARS-CoV-2 variants, we amplified the clinical isolates of an early pandemic D614G-bearing isolate (B.1.1 lineage, strain TKYE610670; GISAID ID: EPI_ISL_479681), a Delta isolate (B.1.617.2 lineage, strain TKYTK1734; GISAID ID: EPI_ISL_2378732) and an Omicron isolate (BA.1 lineage, strain TY38-873; GISAID ID: EPI_ISL_7418017) and prepared the working viruses.

Organism:

Severe acute respiratory syndrome coronavirus 2

Type:

Genome variation profiling by high throughput sequencing

Platform:

GPL28866

3 Samples

Download data: TXT

(Submitter supplied) During the current SARS-CoV-2 pandemic, a variety of mutations have been accumulated in the viral genome, and currently, four variants of concerns (VOCs) are considered as the hazardous SARS-CoV-2 variants to the human society. The newly emerging VOC, the B.1.617.2/Delta variant, closely associates with a huge COVID-19 surge in India in Spring 2021. However, its virological property remains unclear. more...

Organism:

Severe acute respiratory syndrome coronavirus 2

Type:

Genome variation profiling by high throughput sequencing

Platform:

GPL28866

6 Samples

Download data: TXT