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Links from GEO DataSets

Items: 5

1.

Transcriptomic and phenomic investigations reveal elements in biofilm repression and formation in the cyanobacterium Synechococcus elongatus PCC 7942 [RNA-seq]

(Submitter supplied) Biofilm formation by photosynthetic organisms is a complex behavior that serves multiple functions in the environment. Biofilm formation in the unicellular cyanobacterium Synechococcus elongatus PCC 7942 is regulated in part by a set of small secreted proteins that promotes biofilm formation and a self-suppression mechanism that prevents their expression. Little is known about the regulatory and structural components of the biofilms in PCC 7942, or response to the suppressor signal(s). more...
Organism:
Synechococcus elongatus PCC 7942 = FACHB-805
Type:
Expression profiling by high throughput sequencing
Platform:
GPL32315
21 Samples
Download data: TXT
Series
Accession:
GSE205444
ID:
200205444
2.

Transcriptomic and phenomic investigations reveal elements in biofilm repression and formation in the cyanobacterium Synechococcus elongatus PCC 7942

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Synechococcus elongatus PCC 7942 = FACHB-805
Type:
Expression profiling by high throughput sequencing; Other
Platform:
GPL32315
46 Samples
Download data: TXT
Series
Accession:
GSE205445
ID:
200205445
3.

Transcriptomic and phenomic investigations reveal elements in biofilm repression and formation in the cyanobacterium Synechococcus elongatus PCC 7942 [RB-TnSeq]

(Submitter supplied) Biofilm formation by photosynthetic organisms is a complex behavior that serves multiple functions in the environment. Biofilm formation in the unicellular cyanobacterium Synechococcus elongatus PCC 7942 is regulated in part by a set of small secreted proteins that promotes biofilm formation and a self-suppression mechanism that prevents their expression. Little is known about the regulatory and structural components of the biofilms in PCC 7942, or response to the suppressor signal(s). more...
Organism:
Synechococcus elongatus PCC 7942 = FACHB-805
Type:
Other
Platform:
GPL32315
25 Samples
Download data: TXT
Series
Accession:
GSE205443
ID:
200205443
4.

Transcriptome analysis of Synechococcus elongatus PCC 7942 for nitrogen starvation response using RNA sequencing

(Submitter supplied) We reported transcriptome analysis of S. elongatus PCC 7942 for nitrogen starvation response by performing RNA-sequencing. As a result, we identified differentially express genes and confirmed physiological response changes for up or down regulation genes. among differentially expressed genes (p value < 0.01) during N starvation
Organism:
Synechococcus elongatus PCC 7942 = FACHB-805
Type:
Expression profiling by high throughput sequencing
Platform:
GPL21672
6 Samples
Download data: TXT
Series
Accession:
GSE79726
ID:
200079726
5.

Transcriptional profile of Synechococcus in the dark or light with or without photosynthesis inhibitors

(Submitter supplied) In the unicellular cyanobacterium, Synechococcus elongatus PCC 7942, dramatically reduces the transcription rate in the dark (dark repression), and its cellular functions enormously depend on light as an energy source through photosynthetic activity. Here, we employed high-density oligonucleotide arrays to investigate comprehensive profiles of genome-wide Synechococcus gene expression when illuminated or dark-acclimated cells are treated with photosynthesis inhibitors DCMU or DBMIB. more...
Organism:
Synechococcus elongatus PCC 7942 = FACHB-805; Synechococcus elongatus PCC 6301
Type:
Expression profiling by array
Platform:
GPL8012
28 Samples
Download data: CEL
Series
Accession:
GSE55637
ID:
200055637
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