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Links from GEO DataSets

Items: 13

1.
Full record GDS3403

Limb bud zone of polarizing activity

Analysis of zone of polarizing activity (ZPA) from limb buds of E10.5 embryos. The ZPA is a signaling center that is necessary for the normal anteroposterior patterning of the vertebrate limb. Results identify genes, beyond Sonic hedgehog (shh), expressed in the ZPA compared to the rest of the limb.
Organism:
Mus musculus
Type:
Expression profiling by array, count, 2 cell type sets
Platform:
GPL1261
Series:
GSE7598
8 Samples
Download data: CEL, EXP
DataSet
Accession:
GDS3403
ID:
3403
2.

Identification and characterization of genes expressed in the mouse ZPA using a novel microarray approach

(Submitter supplied) Comparing gene expression of cells from the E10.5 limb bud ZPA and the rest of the E10.5 limb bud from Shhgfpcre heterozygotes separated by FACS. Keywords: comparison, cell-type comparison, experiemental versus control
Organism:
Mus musculus
Type:
Expression profiling by array
Dataset:
GDS3403
Platform:
GPL1261
8 Samples
Download data: CEL, EXP
Series
Accession:
GSE7598
ID:
200007598
3.

Identification of Phox2b-regulated genes by expression profiling of cranial motoneuron precursors

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Expression profiling by array
Platforms:
GPL6126 GPL6145
16 Samples
Download data: GPR, TIFF
Series
Accession:
GSE9620
ID:
200009620
4.

Identification of Phox2b-regulated genes by expression profiling of cranial motoneuron precursors on NeuroDev microarray

(Submitter supplied) Branchiomotor neurons are an important class of cranial motor neurons that innervate the branchial-arch-derived muscles of the face, jaw and neck. They arise in the ventralmost progenitor domain of the rhombencephalon characterized by expression of the homeodomain transcription factors Nkx2.2 and Phox2b. Phox2b in particular plays a key role in the specification of branchiomotor neurons. In its absence, generic neuronal differentiation is defective in the progenitor domain, and no branchiomotor neurons are produced. more...
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL6145
8 Samples
Download data: GPR, TIFF
Series
Accession:
GSE9619
ID:
200009619
5.

Identification of Phox2b-regulated genes by expression profiling of cranial motoneuron precursors on NIA 15k microarray

(Submitter supplied) Branchiomotor neurons are an important class of cranial motor neurons that innervate the branchial-arch-derived muscles of the face, jaw and neck. They arise in the ventralmost progenitor domain of the rhombencephalon characterized by expression of the homeodomain transcription factors Nkx2.2 and Phox2b. Phox2b in particular plays a key role in the specification of branchiomotor neurons. In its absence, generic neuronal differentiation is defective in the progenitor domain, and no branchiomotor neurons are produced. more...
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL6126
8 Samples
Download data: GPR, TIFF
Series
Accession:
GSE9603
ID:
200009603
6.

Identification of genes controlled by LMX1B in the developing mouse hindlimb bud

(Submitter supplied) A control vs. genetic knockout experiment aimed at determining what RNAs are upregulated or downregulated in e11.5 mouse proximal limb tissue lacking the Lmx1b gene. Because Lmx1b is required for dorsal-ventral patterning of the limb, this screen gives insight into what putative downstream targets of Lmx1b contribute to dorsal-ventral patterning. Keywords: Genetic allele comparison
Organism:
Mus musculus
Type:
Expression profiling by array
Dataset:
GDS3320
Platform:
GPL1261
6 Samples
Download data: CEL
Series
Accession:
GSE10516
ID:
200010516
7.
Full record GDS3320

Lmx1b knockout effect on embryonic proximal hindlimb buds

Analysis of embryonic (e11.5) proximal hindlimb bud tissues deficient for transcription factor Lmx1b. In the developing limb, dorsal-ventral patterning is controlled by LMX1B, expressed in the dorsal mesenchyme. Results provide insight into the Lmx1b-dependent genes in the developing limb bud.
Organism:
Mus musculus
Type:
Expression profiling by array, transformed count, 2 genotype/variation sets
Platform:
GPL1261
Series:
GSE10516
6 Samples
Download data: CEL
DataSet
Accession:
GDS3320
ID:
3320
8.

Complete embryonic E11.5 metanephric kidney analysis of wild type and Hoxa11, Hoxd11 null targeted mice

(Submitter supplied) E11.5 metanephric mesenchyme and ureteric bud were dissected from the E11.5 kidney rudiment using fine manual microdissection (ureteric bud only) or both fine manual microdissection and laser capture microdissection (metanephric mesenchyme) to define the gene expression profiles of these structures. Additionally, HoxA11, HoxD11 compound null E11.5 metanephric mesenchyme was obtained through laser capture microdissection allowing analysis of possible Hox targets in kidney development. more...
Organism:
Mus musculus
Type:
Expression profiling by array
Dataset:
GDS2032
Platform:
GPL1261
16 Samples
Download data: CEL
Series
Accession:
GSE3822
ID:
200003822
9.

Complete embryonic metanephric kidney analysis of wild type and Hoxa11, Hoxd11 null targeted mice

(Submitter supplied) Complete (whole) embryonic kidneys were dissected from wild type and Hoxa11, Hoxd11 compound null embryons throughout development. Targets from two biological replicates of each were generated and the expression profiles were determined using Affymetrix MOE430A and MOE430B arrays. Comparisons between normal and mutant and comparisons of development samples identified global patterns of gene regulation in kidney development Keywords: embryonic metanephric kidney, kidney development, Hoxa11, Hoxd11, compound null targeted mice
Organism:
Mus musculus
Type:
Expression profiling by array
Datasets:
GDS2030 GDS2031
Platforms:
GPL339 GPL340
28 Samples
Download data: CEL, EXP
Series
Accession:
GSE3808
ID:
200003808
10.
Full record GDS2032

Hoxa11/Hoxd11 null mutation effect on the metanephric mesenchyme

Analysis of metanephric mesenchyme (MM) dissected from the rudimentary kidney of embryonic day E11.5 Hoxa11 Hoxd11 null mutants and wild types. Gene expression in wild type ureteric bud (UB) examined. Hox11 genes are expressed in the early MM and are required for the induction of UB formation.
Organism:
Mus musculus
Type:
Expression profiling by array, count, 2 genotype/variation, 2 tissue sets
Platform:
GPL1261
Series:
GSE3822
16 Samples
Download data: CEL
DataSet
Accession:
GDS2032
ID:
2032
11.
Full record GDS2031

Hoxa11/Hoxd11 null mutation effect on embryonic kidney development (MG-430B)

Analysis of kidneys from Hoxa11/Hoxd11 double null mutants at various embryonic ages up to E16.5. Hox11 genes play critical roles in kidney development. Results provide insight into the molecular mechanisms of Hox11 function in kidney development.
Organism:
Mus musculus
Type:
Expression profiling by array, count, 4 age, 2 genotype/variation sets
Platform:
GPL340
Series:
GSE3808
14 Samples
Download data: CEL, EXP
DataSet
Accession:
GDS2031
ID:
2031
12.
Full record GDS2030

Hoxa11/Hoxd11 null mutation effect on embryonic kidney development (MG-430A)

Analysis of kidneys from Hoxa11/Hoxd11 double null mutants at various embryonic ages up to E16.5. Hox11 genes play critical roles in kidney development. Results provide insight into the molecular mechanisms of Hox11 function in kidney development.
Organism:
Mus musculus
Type:
Expression profiling by array, count, 4 age, 2 genotype/variation sets
Platform:
GPL339
Series:
GSE3808
14 Samples
Download data: CEL, EXP
DataSet
Accession:
GDS2030
ID:
2030
13.

Identification of genes controlled by LMX1B in the developing limb, embryonic day (E) 13.5

(Submitter supplied) A control vs. genetic knockout experiment aimed at determining what RNAs are upregulated or downregulated in E13.5 mouse limb tissue lacking the Lmx1b gene. Because LMX1B is required for dorsal-ventral patterning of the limb, this screen gives insight into what putative downstream targets of Lmx1b contribute to dorsal-ventral patterning.
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL6246
20 Samples
Download data: CEL
Series
Accession:
GSE21446
ID:
200021446
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db=gds|term=|query=1|qty=2|blobid=MCID_61760af5a3aa96031627d1ba|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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