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Links from GEO DataSets

Items: 12

1.
Full record GDS3922

Spatial and temporal development of mammalian salivary glands

Analysis of highly localized regions of salivary gland epithelia from 12.5-, 13.5-, 14-, and 15-day-old ICR embryos. Development of mouse submandibular salivary gland begins at E11.5. Results provide insight into molecular mechanisms underlying salivary gland development and differentiation.
Organism:
Mus musculus
Type:
Expression profiling by array, transformed count, 4 age, 6 tissue sets
Platform:
GPL7202
Series:
GSE22828
84 Samples
Download data: TXT
2.

Atlas of Gene Expression at Microanatomical Resolution of the Submandibular Salivary Gland

(Submitter supplied) The goal of this study was to generate a spatiotemporal atlas of gene expression in the developing salivary gland. This will allow us to identify changes in gene expression that may result in the formation of the different domains of the salivary gland.
Organism:
Mus musculus
Type:
Expression profiling by array
Dataset:
GDS3922
Platform:
GPL7202
84 Samples
Download data: TIFF, TXT, XLS, XLSX
Series
Accession:
GSE22828
ID:
200022828
3.

Single cell RNA-seq identifies cell diversity in embryonic salivary glands

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL18480 GPL19057
19 Samples
Download data: MTX, TSV
Series
Accession:
GSE127470
ID:
200127470
4.

Single cell RNA-seq identifies cell diversity in embryonic salivary glands [Single cell RNA-seq]

(Submitter supplied) Our single-cell and bulk transcriptome analyses revealed striking molecular heterogeneity in the mesenchymal cells of embryonic submandibular and parotid salivary glands during bud initiation, including distinct mesodermal and neural crest-derived molecular signatures that foreshadow later functions.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL19057
4 Samples
Download data: MTX, TSV
Series
Accession:
GSE127469
ID:
200127469
5.

Single cell RNA-seq identifies cell diversity in embryonic salivary glands [Bulk RNA-seq]

(Submitter supplied) Our single-cell and bulk transcriptome analyses revealed striking molecular heterogeneity in the mesenchymal cells of embryonic submandibular and parotid salivary glands during bud initiation, including distinct mesodermal and neural crest-derived molecular signatures that foreshadow later functions.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18480
15 Samples
Download data: TXT
Series
Accession:
GSE127260
ID:
200127260
6.

T7-SAGE transcriptome of cleft versus end bud epithelial cells of embryonic mouse salivary glands

(Submitter supplied) Mus musculus embryonic submandibular salivary glands from embryonic day 12.5 embryos were laser microdissected to isolate epithelial cells from regions adjacent to forming clefts or from the peripheral end bud region. The isolated region-specific samples were then subjected to T7-SAGE transcriptome analysis.
Organism:
Mus musculus
Type:
Expression profiling by SAGE
Platform:
GPL11
2 Samples
Download data
Series
Accession:
GSE22374
ID:
200022374
7.

RNA sequencing of AMD3100-treated E14 embryonic submandibular glands (eSMGs)

(Submitter supplied) In order to elucidate the relationship between CXC chemokine receptor 4 (CXCR4) and embryonic organogenesis, we performed 3' mRNA-seq on control and AMD3100-treated eSMGs.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL19057
6 Samples
Download data: TXT
Series
Accession:
GSE160735
ID:
200160735
8.

The Hippo pathway effector YAP is an essential regulator of submandibular gland ductal progenitor patterning

(Submitter supplied) To investigate the roles of YAP in the submandibular gland (SMG) epithelium, we compared the gene expression profiles of E15.5 SMGs isolated from Yap-loxP/loxP or Yap-loxP/loxP;Shh-Cre (i.e. Cre recombinase from the Shh promoter) embryos.
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL22412
6 Samples
Download data: CEL
Series
Accession:
GSE90480
ID:
200090480
9.

RNA-seq Based Transcriptomic Map Reveals New Insights Into Mouse Salivary Gland Development and Maturation

(Submitter supplied) Analysis of gene expression changes during mouse salivary gland development using RNA-Seq
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL17021
13 Samples
Download data: CSV
Series
Accession:
GSE81097
ID:
200081097
10.

Gene expression of RonTK-/- mammary glands compared to RonTK+/+ controls during development

(Submitter supplied) RON WT and RON KO at 5, 6, 7 week virgin mammary glands In the study, we demonstrated that RON regulates mammary gland branching morphogenesis in pubertal development associated with changes in gene expression. Keywords: Pubertal mammary glands
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL1261
18 Samples
Download data: CEL
Series
Accession:
GSE16629
ID:
200016629
11.

Fork head targets in Stage 11 Drosophila embryos

(Submitter supplied) Transcription factors drive organogenesis, from the initiation of cell fate decisions to the maintenance and implementation of these decisions. The Drosophila embryonic salivary gland provides an excellent platform for unraveling the underlying transcriptional networks of organ development because Drosophila is relatively unencumbered by significant genetic redundancy. The highly conserved FoxA family transcription factors are essential for various aspects of organogenesis in all animals that have been studied. more...
Organism:
Drosophila melanogaster
Type:
Expression profiling by array
Platform:
GPL1322
6 Samples
Download data: CEL
Series
Accession:
GSE28324
ID:
200028324
12.

Single-cell RNAseq analysis of murine salivary gland development

(Submitter supplied) Development of branching organs involves a series of events regulated by proliferation, differentiation, and intricate cell-cell communication networks. Understanding the molecular drivers for these developmental stages is instrumental to device effective regenerative therapies. Here, we use single cell RNAseq of murine submandibular gland (SMG) from developmental stages corresponding to end bud initiation (E12), branching morphogenesis (E14), cytodifferentiation (E16) and postnatal development (P1, P30, and adult) to generate an atlas of SMG development. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL19057
7 Samples
Download data: H5, MTX, TSV
Series
Accession:
GSE150327
ID:
200150327
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Supplemental Content

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