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Items: 5

1.

RNA-sequencing technology identifies specific genes expressed in the ICM of mouse embryos

(Submitter supplied) RNA-seq data from whole mouse embryos at E3.75 (stage where the three cell types: TE, PrE and EPI are well resolved) and from dissected ICMs in order to identify genes expressed specifically in the ICM
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL9318
2 Samples
Download data: TXT
Series
Accession:
GSE44553
ID:
200044553
2.

Genome-wide maps of Sox/Oct partnerships pluripotent and lineage-committed cells

(Submitter supplied) We show here by using genome-wide ChIP-sequencing that lineage segregation involves multiple Sox/Oct partnership. In undifferentiated ES cells Oct4 interacts with Sox2 and both TFs bind on the 'canonical' motif, whereas in cells commited to PrE lineage Oct4 switches from Sox2 to Sox17 interaction and this complex bind to a unique "compressed" motif.
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL11002
20 Samples
Download data: TXT, WIG
Series
Accession:
GSE43275
ID:
200043275
3.

Sox7 and Sox17

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Expression profiling by array
Platforms:
GPL6103 GPL6885
15 Samples
Download data
Series
Accession:
GSE43234
ID:
200043234
4.

Gene expression analysis of V5 tagged Sox17 expressing ES cells

(Submitter supplied) Analysis of the expression of KH2 embryonic stem cells inducibly expressing V5 tagged Sox17 protein. Results provide information on the endodermal gene expression program activated after Sox17 expression in ES cells.
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL6885
10 Samples
Download data: TXT
Series
Accession:
GSE43233
ID:
200043233
5.

Gene expression analysis of F9 cells double knock-down for Sox7 and Sox17

(Submitter supplied) Analysis of the expression of F9 cells after knockdown of Sox7 and Sox17 during their primitive endoderm differnetiation induction with retinoic acid. Results provide information on the endodermal gene expression program regulated by Sox7 and Sox17.
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL6103
5 Samples
Download data: TXT
Series
Accession:
GSE43232
ID:
200043232
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