GEO DataSet Links for SRA (Select 13704506) - GEO DataSets

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Links from SRA

Items: 2

Select item 3051842881.

Total RNA (6 hpf)

Organism:: Strongylocentrotus purpuratus

Source name:: Sea urchin embryos

Platform:: GPL19892
Series:: GSE169227

Download data: BW

Sample

Accession:: GSM5184288

ID:: 305184288

SRA Run Selector

Select item 2001692272.

Global patterns of enhancer activity during sea urchin embryogenesis assessed by eRNA profiling

(Submitter supplied) We used CAGE-seq (Capped Analysis of Gene Expression with Sequencing) to profile eRNA expression and enhancer activity during embryogenesis of the sea urchin, Strongylocentrotus purpuratus. We identified >18,000 enhancers that were active during late oogenesis and early development and documented a burst of enhancer activation during cleavage and early blastula stages. Most enhancers were located near gene bodies and eRNA expression levels were highest for elements near core promoters. more...