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Items: 10

1.

Evolutionary dynamics of gene and isoform regulation in mammalian tissues

(Submitter supplied) Most mammalian genes produce multiple distinct mRNAs through alternative splicing, but the extent of splicing conservation is not clear.  To assess tissue-specific transcriptome variation across mammals, we sequenced cDNA from 9 tissues from 4 mammals and one bird in biological triplicate, at unprecedented depth.  We find that while tissue-specific gene expression programs are largely conserved, alternative splicing is well conserved in only a subset of tissues and is frequently lineage-specific. more...
Organism:
Gallus gallus; Macaca mulatta; Bos taurus; Mus musculus; Rattus norvegicus
Type:
Expression profiling by high throughput sequencing
7 related Platforms
134 Samples
Download data: GTF
Series
Accession:
GSE41637
ID:
200041637
2.

rat_a_testes

Organism:
Rattus norvegicus
Source name:
rat_testes
Platform:
GPL14844
Series:
GSE41637
Download data: GTF
Sample
Accession:
GSM1020674
ID:
301020674
3.

rat_a_spleen

Organism:
Rattus norvegicus
Source name:
rat_spleen
Platform:
GPL14844
Series:
GSE41637
Download data: GTF
Sample
Accession:
GSM1020673
ID:
301020673
4.

rat_a_skm

Organism:
Rattus norvegicus
Source name:
rat_skm
Platform:
GPL14844
Series:
GSE41637
Download data: GTF
Sample
Accession:
GSM1020672
ID:
301020672
5.

rat_a_lung

Organism:
Rattus norvegicus
Source name:
rat_lung
Platform:
GPL14844
Series:
GSE41637
Download data: GTF
Sample
Accession:
GSM1020671
ID:
301020671
6.

rat_a_kidney

Organism:
Rattus norvegicus
Source name:
rat_kidney
Platform:
GPL14844
Series:
GSE41637
Download data: GTF
Sample
Accession:
GSM1020669
ID:
301020669
7.

rat_a_heart

Organism:
Rattus norvegicus
Source name:
rat_heart
Platform:
GPL14844
Series:
GSE41637
Download data: GTF
Sample
Accession:
GSM1020668
ID:
301020668
8.

rat_a_colon

Organism:
Rattus norvegicus
Source name:
rat_colon
Platform:
GPL14844
Series:
GSE41637
Download data: GTF
Sample
Accession:
GSM1020667
ID:
301020667
9.

rat_a_brain

Organism:
Rattus norvegicus
Source name:
rat_brain
Platform:
GPL14844
Series:
GSE41637
Download data: GTF
Sample
Accession:
GSM1020666
ID:
301020666
10.

rat_a_liver

Organism:
Rattus norvegicus
Source name:
rat_liver
Platform:
GPL10669
Series:
GSE41637
Download data: GTF
Sample
Accession:
GSM1020670
ID:
301020670
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Supplemental Content

db=gds|term=txid10116[orgn]%20AND%20%22strain%20F344/Cr1%22[All%20Fields]|query=1|qty=6|blobid=MCID_662a3471f4364867155ef5a7|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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