txid1423[orgn] AND "strain WILD"[All Fields] - GEO DataSets - NCBI

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Items: 20

Select item 2001991511.

Transcriptome sequencing data analysis of Bacillus subtilis NCIB 3610 wild-type strain, tmRNA mutant strain and MB revertant strain

(Submitter supplied) In our study, we found that lack of tmRNA affects the biofilm formation in Bacillus subtilis, which has important research significance. Then, we obtained a revertant strain MB from tmRNA mutant strain. And MB strain could restore biofilm production capacity. Therefore, the transcriptomes of the three strains were sequenced. Based on the statistical analysis of gene expression (P < 0.05), there were 756 genes up regulated while 992 genes down regulated by at least two folds when comparing TM to WT. more...

Organism:: Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10

Type:: Expression profiling by high throughput sequencing

Platform:: GPL32075
9 Samples

Download data: TXT

Series

Accession:: GSE199151

ID:: 200199151

PubMed Full text in PMC Similar studies

Select item 2000183452.

Transcriptome analysis of Bacillus subtilis salt stress adaptation

(Submitter supplied) Whole-genome microarray technology and state-of-the-art proteomic techniques were applied to provide a global and time-resolved picture of the physiological response of B. subtilis cells exposed to a severe and sudden osmotic up-shift. This combined experimental approach provided quantitative data for 3961 mRNA profiles, 590 expression profiles of proteins detected in the cytosol and 383 expression profiles of proteins detected in the membrane fraction. more...

Organism:: Bacillus subtilis

Type:: Expression profiling by array

Platform:: GPL3502
15 Samples

Download data: CSV

Series

Accession:: GSE18345

ID:: 200018345

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 3059653273.

Organism:: Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10

Source name:: Bacteria

Platform:: GPL32075
Series:: GSE199151

Download data: TXT

Sample

Accession:: GSM5965327

ID:: 305965327

SRA Run Selector

Select item 3059653264.

Organism:: Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10

Source name:: Bacteria

Platform:: GPL32075
Series:: GSE199151

Download data: TXT

Sample

Accession:: GSM5965326

ID:: 305965326

SRA Run Selector

Select item 3059653255.

Organism:: Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10

Source name:: Bacteria

Platform:: GPL32075
Series:: GSE199151

Download data: TXT

Sample

Accession:: GSM5965325

ID:: 305965325

SRA Run Selector

Select item 3004580306.

B. subtilis_salt stress_120min_rep3

Organism:: Bacillus subtilis

Source name:: pooled RNA (equal amounts of RNA from all samples) (channel 1) salt stressed cells - 120 min after addition of 6% NaCl (channel 2)

Platform:: GPL3502
Series:: GSE18345

Download data: CSV

Sample

Accession:: GSM458030

ID:: 300458030

Select item 3004580297.

B. subtilis_salt stress_60min_rep3

Organism:: Bacillus subtilis

Source name:: pooled RNA (equal amounts of RNA from all samples) (channel 1) salt stressed cells - 60 min after addition of 6% NaCl (channel 2)

Platform:: GPL3502
Series:: GSE18345

Download data: CSV

Sample

Accession:: GSM458029

ID:: 300458029

Select item 3004580288.

B. subtilis_salt stress_30min_rep3

Organism:: Bacillus subtilis

Source name:: pooled RNA (equal amounts of RNA from all samples) (channel 1) salt stressed cells - 30 min after addition of 6% NaCl (channel 2)

Platform:: GPL3502
Series:: GSE18345

Download data: CSV

Sample

Accession:: GSM458028

ID:: 300458028

Select item 3004580279.

B. subtilis_salt stress_10min_rep3

Organism:: Bacillus subtilis

Source name:: pooled RNA (equal amounts of RNA from all samples) (channel 1) salt stressed cells - 10 min after addition of 6% NaCl (channel 2)

Platform:: GPL3502
Series:: GSE18345

Download data: CSV

Sample

Accession:: GSM458027

ID:: 300458027

Select item 30045802610.

B. subtilis_salt stress_0min_rep3

Organism:: Bacillus subtilis

Source name:: pooled RNA (equal amounts of RNA from all samples) (channel 1) exponentially growing cells - before addition of NaCl (channel 2)

Platform:: GPL3502
Series:: GSE18345

Download data: CSV

Sample

Accession:: GSM458026

ID:: 300458026

Select item 30045802511.

B. subtilis_salt stress_120min_rep2

Organism:: Bacillus subtilis

Source name:: pooled RNA (equal amounts of RNA from all samples) (channel 1) salt stressed cells - 120 min after addition of 6% NaCl (channel 2)

Platform:: GPL3502
Series:: GSE18345

Download data: CSV

Sample

Accession:: GSM458025

ID:: 300458025

Select item 30045802412.

B. subtilis_salt stress_60min_rep2

Organism:: Bacillus subtilis

Source name:: pooled RNA (equal amounts of RNA from all samples) (channel 1) salt stressed cells - 60 min after addition of 6% NaCl (channel 2)

Platform:: GPL3502
Series:: GSE18345

Download data: CSV

Sample

Accession:: GSM458024

ID:: 300458024

Select item 30045802313.

B. subtilis_salt stress_30min_rep2

Organism:: Bacillus subtilis

Source name:: pooled RNA (equal amounts of RNA from all samples) (channel 1) salt stressed cells - 30 min after addition of 6% NaCl (channel 2)

Platform:: GPL3502
Series:: GSE18345

Download data: CSV

Sample

Accession:: GSM458023

ID:: 300458023

Select item 30045802214.

B. subtilis_salt stress_10min_rep2

Organism:: Bacillus subtilis

Source name:: pooled RNA (equal amounts of RNA from all samples) (channel 1) salt stressed cells - 10 min after addition of 6% NaCl (channel 2)

Platform:: GPL3502
Series:: GSE18345

Download data: CSV

Sample

Accession:: GSM458022

ID:: 300458022

Select item 30045802115.

B. subtilis_salt stress_0min_rep2

Organism:: Bacillus subtilis

Source name:: pooled RNA (equal amounts of RNA from all samples) (channel 1) exponentially growing cells - before addition of NaCl (channel 2)

Platform:: GPL3502
Series:: GSE18345

Download data: CSV

Sample

Accession:: GSM458021

ID:: 300458021

Select item 30045802016.

B. subtilis_salt stress_120min_rep1

Organism:: Bacillus subtilis

Source name:: pooled RNA (equal amounts of RNA from all samples) (channel 1) salt stressed cells - 120 min after addition of 6% NaCl (channel 2)

Platform:: GPL3502
Series:: GSE18345

Download data: CSV

Sample

Accession:: GSM458020

ID:: 300458020

Select item 30045801917.

B. subtilis_salt stress_60min_rep1

Organism:: Bacillus subtilis

Source name:: pooled RNA (equal amounts of RNA from all samples) (channel 1) salt stressed cells - 60 min after addition of 6% NaCl (channel 2)

Platform:: GPL3502
Series:: GSE18345

Download data: CSV

Sample

Accession:: GSM458019

ID:: 300458019

Select item 30045801818.

B. subtilis_salt stress_30min_rep1

Organism:: Bacillus subtilis

Source name:: pooled RNA (equal amounts of RNA from all samples) (channel 1) salt stressed cells - 30 min after addition of 6% NaCl (channel 2)

Platform:: GPL3502
Series:: GSE18345

Download data: CSV

Sample

Accession:: GSM458018

ID:: 300458018

Select item 30045801719.

B. subtilis_salt stress_10min_rep1

Organism:: Bacillus subtilis

Source name:: pooled RNA (equal amounts of RNA from all samples) (channel 1) salt stressed cells - 10 min after addition of 6% NaCl (channel 2)

Platform:: GPL3502
Series:: GSE18345

Download data: CSV

Sample

Accession:: GSM458017

ID:: 300458017

Select item 30045801620.

B. subtilis_salt stress_0min_rep1

Organism:: Bacillus subtilis

Source name:: pooled RNA (equal amounts of RNA from all samples) (channel 1) exponentially growing cells - before addition of NaCl (channel 2)

Platform:: GPL3502
Series:: GSE18345

Download data: CSV

Sample

Accession:: GSM458016

ID:: 300458016

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txid1423[orgn] AND "strain WILD"[All Fields] (20)
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