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Items: 5

1.

Identification of transcription factor EOR-1 binding sites in C.elegans

(Submitter supplied) We, being members of modENCODE consortium, have established an experimetal pipeline in C.elegans that allows global identification of the binding sites for transcription factors using chromatin immunoprecipitation followed by illumina high-throughput sequencing (ChIP-seq). In current study, we identified the binding sites for EOR-1 at L3 stage, which plays important roles in regulating RAS/RAF-mediated signaling during excretory system development and RAS/RAF- and WNT-mediated signaling during P12 fate specification. more...
Organism:
Caenorhabditis elegans
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL9309
4 Samples
Download data: GFF3, TXT
Series
Accession:
GSE17456
ID:
200017456
2.

EOR-1 L3 replicate 2 Input

Organism:
Caenorhabditis elegans
Source name:
OP81, EOR-1:GFP:3xFLAG animals
Platform:
GPL9309
Series:
GSE17456
Download data: TXT
Sample
Accession:
GSM435303
ID:
300435303
3.

EOR-1 L3 replicate 2 GFP

Organism:
Caenorhabditis elegans
Source name:
OP81, EOR-1:GFP:3xFLAG animals
Platform:
GPL9309
Series:
GSE17456
Download data: GFF3, TXT
Sample
Accession:
GSM435302
ID:
300435302
4.

EOR-1 L3 replicate 1 Input

Organism:
Caenorhabditis elegans
Source name:
OP81, EOR-1:GFP:3xFLAG animals
Platform:
GPL9309
Series:
GSE17456
Download data: TXT
Sample
Accession:
GSM435301
ID:
300435301
5.

EOR-1 L3 replicate 1 GFP

Organism:
Caenorhabditis elegans
Source name:
OP81, EOR-1:GFP:3xFLAG animals
Platform:
GPL9309
Series:
GSE17456
Download data: GFF3, TXT
Sample
Accession:
GSM435300
ID:
300435300
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Supplemental Content

db=gds|term=txid6239[orgn]%20AND%20%22strain%20OP81%22[All%20Fields]|query=1|qty=2|blobid=MCID_661eb39cd4af9b20894cb91e|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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