GEO DataSets

(Submitter supplied) To investigate the underlying mechanisms that which genes involving in M. oryzae peroxisome dynamics in response to oxidative stress.

Organism:

Pyricularia oryzae; Oryza sativa

Type:

Expression profiling by high throughput sequencing

Platforms:

GPL33328 GPL32309

6 Samples

Download data: XLS

(Submitter supplied) RNA-seq of 16 M. oryzae rice isolates in hyphal stage

Organism:

Pyricularia oryzae

Type:

Expression profiling by high throughput sequencing

Platform:

GPL32309

32 Samples

Download data: TXT

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Pyricularia oryzae

Type:

Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing

Platform:

GPL32309

55 Samples

Download data: BEDGRAPH, TXT

(Submitter supplied) A putative EAF3/MRG15 ortholog N1617, containing chromo and MRG domain, is a partner of Ash1 in Magnaporthe oryzae

Organism:

Pyricularia oryzae

Type:

Genome binding/occupancy profiling by high throughput sequencing

Platform:

GPL32309

43 Samples

Download data: BEDGRAPH, TXT

(Submitter supplied) A putative EAF3/MRG15 ortholog N1617, containing chromo and MRG domain, is a partner of Ash1 in Magnaporthe oryzae

Organism:

Pyricularia oryzae

Type:

Expression profiling by high throughput sequencing

Platform:

GPL32309

12 Samples

Download data: TXT

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Pyricularia oryzae

Type:

Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing

Platform:

GPL29717

38 Samples

Download data: BEDGRAPH, TXT

(Submitter supplied) Di- and tri-methylation of lysine 36 on histone H3 (H3K36me2/3) are catalyzed by SET2 histone methyltransferase which play an important role in transcriptional elongation.we reveal a novel mechanism by which H3K36me2 and H3K36me3 associates with opposite transcriptional activity and Ash1 is required for the normal distribution of facultative heterochromatic modifications and stable maintenance of transcriptional silencing in eukaryotes.

Organism:

Pyricularia oryzae

Type:

Expression profiling by high throughput sequencing

Platform:

GPL29717

12 Samples

Download data: TXT

(Submitter supplied) Di- and tri-methylation of lysine 36 on histone H3 (H3K36me2/3) are catalyzed by SET2 histone methyltransferase which play an important role in transcriptional elongation.we reveal a novel mechanism by which H3K36me2 and H3K36me3 associates with opposite transcriptional activity and Ash1 is required for the normal distribution of facultative heterochromatic modifications and stable maintenance of transcriptional silencing in eukaryotes.

Organism:

Pyricularia oryzae

Type:

Genome binding/occupancy profiling by high throughput sequencing

Platform:

GPL29717

26 Samples

Download data: BEDGRAPH, TXT

(Submitter supplied) To study the effect of plant metabolites on M. oryzae, we selected salicylic acid (SA), abscisic acid (ABA), and sakuranetin to treat M. oryzae grown on the medium with the concentration of 100μM. After 10 days' treatment, the total RNA were extracted and detected the transcriptome.

Organism:

Pyricularia oryzae

Type:

Expression profiling by high throughput sequencing

Platform:

GPL32309

12 Samples

Download data: TXT

(Submitter supplied) To investigate the function of Momet2 in Magnaporthe oryzae, we generated Momet2 mutant. To understand the impact of MoMET2-depentent 5mC to gene expression at the transcriptional level, we performed comparative transcriptome analysis using the materials harvested from Guy11 and ΔMomet2 mycelium samples.

Organism:

Pyricularia oryzae

Type:

Expression profiling by high throughput sequencing

Platform:

GPL32309

4 Samples

Download data: TXT

(Submitter supplied) RNA-seq of 9 M. oryzae isolates

Organism:

Pyricularia oryzae

Type:

Expression profiling by high throughput sequencing

Platform:

GPL26389

9 Samples

Download data: TXT

(Submitter supplied) We report different roles of three PRC2 components, KMT6, P55 and SIN3 played in distribution of genome-wide H3K27 tri-methylation of Pyricularia oryzae. Polycomb repressive complex 2 (PRC2), which is composed of Ezh(Kmt6), Su(z)12, Esc(Eed) and accessory subunits RbAp48/Nurf55(P55), catalyzes the methylation of histone H3 at lysine 27. Loss of P55 caused severe global defects in the normal distribution of H3K27me3 and transcriptional reprogramming on the H3K27me3-occupied genes. more...

Organism:

Pyricularia oryzae

Type:

Genome binding/occupancy profiling by high throughput sequencing

Platform:

GPL29717

16 Samples

Download data: BEDGRAPH, TXT

(Submitter supplied) Magnaporthe oryzae is notorious for its efficient evolution as a plant pathogen. Analysis of well organised fungal pathogenic mechanisms would enable the scientific understanding to fight against pathogens. Histidine phosphotransferase in fungal systems are good targets for antifungals since they are component of SAPK pathway, which is essential for survival of the fungus. The histidine Phosphotransferase YPD1 in M. more...

Organism:

Pyricularia oryzae

Type:

Expression profiling by high throughput sequencing

Platform:

GPL31161

2 Samples

Download data: XLSX

(Submitter supplied) We report that the homeobox trasncription factor called HOX7 controls hyphae-associated genes, autophagy and cell cycle related genes necessary for appressorium development in the rice blast fungus Magnaporthe oryzae. We also report that the ste transcription factor MST12 regulates gene functions involved in septin reorientation.

Organism:

Pyricularia oryzae

Type:

Genome binding/occupancy profiling by high throughput sequencing

Platform:

GPL29553

10 Samples

Download data: BED

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Pyricularia oryzae

Type:

Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing

Platform:

GPL29717

43 Samples

Download data: BEDGRAPH, TXT

(Submitter supplied) We report that suppression of polycomb-mediated H3K27me3 epigenetically de-repressed the genome-wide expression of effectomes in the vegetative growth stage. Tthe chromatin regions of effectors were directly occupied with H3K27me3 modification in the vegetative growth stage. P55, the additional subunit of PRC2, could recruit Sin3 histone deacetylation complex to prompt H3K27me3 occupancy for stably maintaining transcriptional silencing of the target genes.

Organism:

Pyricularia oryzae

Type:

Expression profiling by high throughput sequencing

Platform:

GPL29717

6 Samples

Download data: TXT

(Submitter supplied) We report that suppression of polycomb-mediated H3K27me3 epigenetically de-repressed the genome-wide expression of effectomes in the vegetative growth stage. Tthe chromatin regions of effectors were directly occupied with H3K27me3 modification in the vegetative growth stage. P55, the additional subunit of PRC2, could recruit Sin3 histone deacetylation complex to prompt H3K27me3 occupancy for stably maintaining transcriptional silencing of the target genes.

Organism:

Pyricularia oryzae

Type:

Expression profiling by high throughput sequencing

Platform:

GPL29717

15 Samples

Download data: TXT

(Submitter supplied) We report that suppression of polycomb-mediated H3K27me3 epigenetically de-repressed the genome-wide expression of effectomes in the vegetative growth stage. Tthe chromatin regions of effectors were directly occupied with H3K27me3 modification in the vegetative growth stage. P55, the additional subunit of PRC2, could recruit Sin3 histone deacetylation complex to prompt H3K27me3 occupancy for stably maintaining transcriptional silencing of the target genes.

Organism:

Pyricularia oryzae

Type:

Expression profiling by high throughput sequencing

Platform:

GPL29717

6 Samples

Download data: TXT

(Submitter supplied) We report that suppression of polycomb-mediated H3K27me3 epigenetically de-repressed the genome-wide expression of effectomes in the vegetative growth stage. Tthe chromatin regions of effectors were directly occupied with H3K27me3 modification in the vegetative growth stage. P55, the additional subunit of PRC2, could recruit Sin3 histone deacetylation complex to prompt H3K27me3 occupancy for stably maintaining transcriptional silencing of the target genes.

Organism:

Pyricularia oryzae

Type:

Genome binding/occupancy profiling by high throughput sequencing

Platform:

GPL29717

8 Samples

Download data: BEDGRAPH, TXT

(Submitter supplied) We report that suppression of polycomb-mediated H3K27me3 epigenetically de-repressed the genome-wide expression of effectomes in the vegetative growth stage. Tthe chromatin regions of effectors were directly occupied with H3K27me3 modification in the vegetative growth stage. P55, the additional subunit of PRC2, could recruit Sin3 histone deacetylation complex to prompt H3K27me3 occupancy for stably maintaining transcriptional silencing of the target genes.

Organism:

Pyricularia oryzae

Type:

Genome binding/occupancy profiling by high throughput sequencing

Platform:

GPL29717

8 Samples

Download data: BEDGRAPH, TXT