GEO DataSets

(Submitter supplied) A major challenge of modern biology is to understand how naturally occurring variation in DNA sequences affects complex organismal phenotypes through networks of intermediate molecular phenotypes. Here, we performed deep RNA sequencing of 200 Drosophila Genetic Reference Panel inbred lines with complete genome sequences and mapped expression quantitative trait loci for annotated genes, novel transcribed regions (most of which are long noncoding RNAs), transposable elements and microbial species. more...

Organism:

Drosophila melanogaster

Type:

Expression profiling by high throughput sequencing

Platform:

GPL17275

800 Samples

Download data: TXT

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Drosophila ananassae; Drosophila virilis; Drosophila pseudoobscura; Drosophila melanogaster; Drosophila simulans; Drosophila yakuba

Type:

Expression profiling by high throughput sequencing; Other

10 related Platforms

66 Samples

Download data: TXT

(Submitter supplied) We applied microfluidic multiplex PCR and deep sequencing (mmPCR-seq) and targeted RNA sequencing to quantify RNA editing levels at targeted sites in 6 Drosophila species and 8 strains of D. melanogaster.

Organism:

Drosophila melanogaster; Drosophila simulans; Drosophila yakuba; Drosophila pseudoobscura; Drosophila ananassae; Drosophila virilis

Type:

Expression profiling by high throughput sequencing; Other

9 related Platforms

52 Samples

Download data: TXT