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Items: 1 to 20 of 33045

1.

Sequencing of Danio rerio skin for 3 age groups

(Submitter supplied) Comparison of temporal gene expression profiles from Danio rerio skin. The RNA-seq data comprise 3 age groups at 5, 24 and 30 months. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)
Organism:
Danio rerio
Type:
Expression profiling by high throughput sequencing
Platform:
GPL15583
4 Samples
Download data: XLS
Series
Accession:
GSE118608
ID:
200118608
2.

Sequencing of Danio rerio skin for 5 age groups

(Submitter supplied) Comparison of temporal small RNA gene expression profiles from Danio rerio skin. The smallRNA-seq data comprise 5 age groups at 6, 12, 24, 36 and 42 months. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)
Organism:
Danio rerio
Type:
Non-coding RNA profiling by high throughput sequencing
Platform:
GPL18413
25 Samples
Download data: XLS
Series
Accession:
GSE117820
ID:
200117820
3.

Sequencing of Danio rerio brain for 5 age groups

(Submitter supplied) Comparison of temporal small RNA gene expression profiles from Danio rerio brain. The smallRNA-seq data comprise 5 age groups at 6, 12, 24, 36 and 42 months. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)
Organism:
Danio rerio
Type:
Non-coding RNA profiling by high throughput sequencing
Platform:
GPL18413
25 Samples
Download data: XLS
Series
Accession:
GSE117807
ID:
200117807
4.

Sequencing of Danio rerio embryo from wildtype and microRNA treated animals

(Submitter supplied) Comparison of gene expression profiles from Danio rerio embryos of wiltype, miR-101a and miR-29a treated animals. The RNA-seq data comprise 3 groups. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)
Organism:
Danio rerio
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18413
12 Samples
Download data: XLS
Series
Accession:
GSE103801
ID:
200103801
5.

Sequencing of Danio rerio brain from wildtype and Tg-microRNA-sponge animals

(Submitter supplied) Comparison of gene expression profiles from Danio rerio brain of wiltype and Tg-microRNA-sponge animals. The RNA-seq data comprise 3 groups. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)
Organism:
Danio rerio
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18413
12 Samples
Download data: XLS
Series
Accession:
GSE103134
ID:
200103134
6.

Sequencing of Danio rerio skin from wildtype and two tert mutant phenotypes (JenAge)

(Submitter supplied) Comparison of gene expression profiles from Danio rerio skin of wiltype (AB) and homozygote/heterozygote tert mutant phenotypes (AB tert(-/-), AB tert(+/)). The RNA-seq data comprises 3 groups. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)
Organism:
Danio rerio
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18413
13 Samples
Download data: XLS
Series
Accession:
GSE102434
ID:
200102434
7.

Sequencing of Danio rerio skin for 2 age groups

(Submitter supplied) Comparison of Danio rerio skin for 2 age groups treated with Rotenone. The RNA-seq data comprises two age groups treated with different Rotenone dose levels. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)
Organism:
Danio rerio
Type:
Expression profiling by high throughput sequencing
Platform:
GPL14875
26 Samples
Download data: XLS
Series
Accession:
GSE102433
ID:
200102433
8.

Sequencing of Danio rerio skin for 2 age groups after physical exercise

(Submitter supplied) Comparison of gene expression profiles from Danio rerio skin for 2 age groups. The RNA-seq data comprise 2 x 2 groups: two age groups, each with and without physical exercise (swim-tunnel). Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)
Organism:
Danio rerio
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18413
20 Samples
Download data: XLS
Series
Accession:
GSE102432
ID:
200102432
9.

Sequencing of Danio rerio muscle from tert mutants and controls

(Submitter supplied) Comparison of gene expression profiles from Danio rerio muscle of wiltype (AB) and homozygote/heterozygote tert mutants (AB tert(-/-), AB tert(+/)). The RNA-seq data comprise 3 groups. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)
Organism:
Danio rerio
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18413
13 Samples
Download data: XLS
Series
Accession:
GSE102431
ID:
200102431
10.

Sequencing of Danio rerio muscle for 2 age groups after physical exercise

(Submitter supplied) Comparison of gene expression profiles from Danio rerio muscle for 2 age groups. The RNA-seq data comprise 2 x 2 groups: two age groups, each with and without physical exercise (swim-tunnel). Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)
Organism:
Danio rerio
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18413
20 Samples
Download data: XLS
Series
Accession:
GSE102430
ID:
200102430
11.

Sequencing of Danio rerio liver from tert mutants and controls

(Submitter supplied) Comparison of gene expression profiles from Danio rerio liver of wiltype (AB) and homozygote/heterozygote tert mutants (AB tert(-/-), AB tert(+/)). The RNA-seq data comprise 3 groups. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)
Organism:
Danio rerio
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18413
13 Samples
Download data: XLS
Series
Accession:
GSE102429
ID:
200102429
12.

Sequencing of Danio rerio liver for 2 age groups

(Submitter supplied) Comparison of Danio rerio liver for 2 age groups treated with Rotenone. The RNA-seq data comprisess two age groups treated with Rotenone. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)
Organism:
Danio rerio
Type:
Expression profiling by high throughput sequencing
Platform:
GPL14875
24 Samples
Download data: XLS
Series
Accession:
GSE102428
ID:
200102428
13.

Sequencing of Danio rerio liver for 2 age groups after physical exercise

(Submitter supplied) Comparison of gene expression profiles from Danio rerio liver for 2 age groups. The RNA-seq data comprise 2 x 2 groups: two age groups, each with and without physical exercise (swim-tunnel). Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)
Organism:
Danio rerio
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18413
20 Samples
Download data: XLS
Series
Accession:
GSE102427
ID:
200102427
14.

Sequencing of Danio rerio brain from tert mutants and controls

(Submitter supplied) Comparison of gene expression profiles from Danio rerio brain of wiltype (AB) and homozygote/heterozygote tert mutants (AB tert(-/-), AB tert(+/-)). The RNA-seq data comprise 3 groups. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)
Organism:
Danio rerio
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18413
13 Samples
Download data: XLS
Series
Accession:
GSE102426
ID:
200102426
15.

Sequencing of Danio rerio brain for 2 age groups after Rotenone treatment

(Submitter supplied) Comparison of Danio rerio brain for 2 age groups treated with Rotenone. The RNA-seq data comprises two age groups treated with different Rotenone dose levels. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)
Organism:
Danio rerio
Type:
Expression profiling by high throughput sequencing
Platform:
GPL14875
26 Samples
Download data: XLS
Series
Accession:
GSE102425
ID:
200102425
16.

Sequencing of Danio rerio brain for 2 age groups after physical exercise

(Submitter supplied) Comparison of gene expression profiles from Danio rerio brain for 2 age groups. The RNA-seq data comprise 2 x 2 groups: two age groups, each with and without physical exercise (swim-tunnel). Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)
Organism:
Danio rerio
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18413
20 Samples
Download data: XLS
Series
Accession:
GSE102424
ID:
200102424
17.

RNA-Seq from zebrafish adult tissues

(Submitter supplied) The goal of this study was to profile transcript expression levels across zebrafish adult tissues.
Organism:
Danio rerio
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18413
27 Samples
Download data: TSV
Series
Accession:
GSE171906
ID:
200171906
18.

A comparative analysis of gene and protein expression throughout a full 28-day retinal regeneration time-course in adult zebrafish

(Submitter supplied) Following photoreceptors ablation by intense light exposure, adult zebrafish are capable of complete regeneration due to the ability of their Müller glia (MG) to re-enter the cell cycle, creating progenitors that differentiate into new photoreceptors. The majority of previous reports on retinal regeneration focused on the first few days of the regenerative response, which include MG cell-cycle re-entry and progenitor cell proliferation. more...
Organism:
Danio rerio
Type:
Expression profiling by high throughput sequencing
Platform:
GPL24995
54 Samples
Download data: XLSX
Series
Accession:
GSE180518
ID:
200180518
19.

Agilent zebrafish V3 array 4´44K microarray-Aflatoxin B1 treated with 6-48 hpf zebrafish embryos

(Submitter supplied) To investigate the effects of Aflatoxin B1 on gene expressions in zebrafish embryos.
Organism:
Danio rerio
Type:
Expression profiling by array
Platform:
GPL14664
2 Samples
Download data: TXT
Series
Accession:
GSE121125
ID:
200121125
20.

Zebrafish pigment cells develop directly from persistent highly multipotent progenitors

(Submitter supplied) Neural crest cells (NCCs) are highly multipotent stem cells. A long-standing controversy exists over the mechanism of NCC fate specification, specifically regarding the presence and potency of intermediate progenitors. The direct fate restriction (DFR) model, based on early in vivo clonal studies, hypothesised that intermediates are absent and that migrating cells maintain full multipotency1-6. However, most authors favour progressive fate restriction (PFR) models, with fully multipotent early NCCs (ENCCs) transitioning to partially- restricted intermediates before committing to individual fates7-12. Here, single cell transcriptional profiling of zebrafish pigment cell development leads to us proposing a Cyclical Fate Restriction mechanism of NCC development that reconciles the DFR and PFR models. Our clustering of single NCC Nanostring transcriptional profiles identifies only broadly multipotent intermediate states between ENCCs and differentiated melanocytes and iridophores. Leukocyte tyrosine kinase (Ltk) marks the multipotent progenitor and iridophores, consistent with biphasic ltk expression13-15. Ltk inhibitor and constitutive activation studies support expression at an early multipotent stage, whilst lineage-tracing of ltk-expressing cells reveals their multipotency extends beyond pigment cell-types to neural fates. We conclude that pigment cell development does not involve a conventional PFR mechanism, but instead occurs directly and more dynamically from a broadly multipotent intermediate state.
Organism:
Danio rerio
Type:
Other
Platform:
GPL30670
1227 Samples
Download data: RCC
Series
Accession:
GSE185592
ID:
200185592
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