spdya speedy/RINGO cell cycle regulator family member A [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: spdyaprovided by ZNC
Official Full Name: speedy/RINGO cell cycle regulator family member Aprovided by ZNC
Primary source: ZFIN:ZDB-GENE-041010-194
See related: Ensembl:ENSDARG00000059131 AllianceGenome:ZFIN:ZDB-GENE-041010-194
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:101624
Summary: Predicted to enable protein kinase binding activity. Orthologous to human SPDYA (speedy/RINGO cell cycle regulator family member A). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 17

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	17	NC_007128.7 (24807938..24815220)
105	previous assembly	GRCz10 (GCF_000002035.5)	17	NC_007128.6 (24790822..24796819)

Chromosome 17 - NC_007128.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables protein kinase binding	IBA Inferred from Biological aspect of Ancestor more info
enables protein kinase binding	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: speedy protein A

Names: speedy 1; speedy homolog A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001006091.1 → NP_001006091.1 speedy protein A

See identical proteins and their annotated locations for NP_001006091.1

Status: PROVISIONAL

Source sequence(s)

BC083227

UniProtKB/TrEMBL

Q5XJS1

Related

ENSDARP00000076688.5, ENSDART00000082251.7

Conserved Domains (1) summary

pfam11357
Location:59 → 189

Spy1; Cell cycle regulatory protein

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007128.7 Reference GRCz11 Primary Assembly

Range

24807938..24815220

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_021467085.1 → XP_021322760.1 speedy protein A isoform X1

UniProtKB/TrEMBL

A0A8M9PNI1, F1QWB8

Conserved Domains (1) summary

pfam11357
Location:59 → 189

Spy1; Cell cycle regulatory protein