sv2ba synaptic vesicle glycoprotein 2Ba [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: sv2baprovided by ZNC
Official Full Name: synaptic vesicle glycoprotein 2Baprovided by ZNC
Primary source: ZFIN:ZDB-GENE-070209-134
See related: Ensembl:ENSDARG00000057427 AllianceGenome:ZFIN:ZDB-GENE-070209-134
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:158677
Summary: Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within chemical synaptic transmission and transmembrane transport. Predicted to be located in membrane. Predicted to be active in neuron projection and synaptic vesicle membrane. Predicted to be integral component of membrane. Orthologous to human SV2B (synaptic vesicle glycoprotein 2B). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 7

Exon count:: 13

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	7	NC_007118.7 (15266105..15303864)
105	previous assembly	GRCz10 (GCF_000002035.5)	7	NC_007118.6 (15017818..15055577)

Chromosome 7 - NC_007118.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables transmembrane transporter activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within chemical synaptic transmission	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within transmembrane transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
is_active_in synaptic vesicle membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: synaptic vesicle glycoprotein 2Ba

Names: synaptic vesicle glycoprotein 2 ba

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001082995.1 → NP_001076464.1 synaptic vesicle glycoprotein 2Ba

See identical proteins and their annotated locations for NP_001076464.1

Status: PROVISIONAL

Source sequence(s)

BC133144

UniProtKB/TrEMBL

A2RV23

Related

ENSDARP00000106886.1, ENSDART00000124676.4

Conserved Domains (2) summary

cd06174
Location:116 → 678

MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...

TIGR01299
Location:36 → 689

synapt_SV2; synaptic vesicle protein SV2