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prkacb protein kinase cAMP-activated catalytic subunit beta [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100038053, updated on 8-Mar-2024

Summary

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Official Symbol
prkacbprovided by Xenbase
Official Full Name
protein kinase cAMP-activated catalytic subunit betaprovided by Xenbase
Primary source
Xenbase:XB-GENE-482702
See related
Ensembl:ENSXETG00000008649
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
pkacb; XPKAbeta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
12
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (77759249..77813999, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (29766727..29830452, complement)

Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene sterile alpha motif domain containing 13 Neighboring gene urate oxidase Neighboring gene tubulin tyrosine ligase like 7 Neighboring gene adhesion G protein-coupled receptor L2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC80071

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables AMP-activated protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables cAMP-dependent protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within phosphorylation IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
cAMP-dependent protein kinase catalytic subunit beta
Names
p70 S6 kinase
protein kinase, cAMP-dependent, beta catalytic subunit
protein kinase, cAMP-dependent, catalytic, beta
NP_001164667.1
XP_031755570.1
XP_031755571.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001171196.1 → NP_001164667.1  cAMP-dependent protein kinase catalytic subunit beta

    Status: PROVISIONAL

    Source sequence(s)
    CT030294
    UniProtKB/TrEMBL
    A0A6I8Q9L3, F6UP78
    Related
    ENSXETP00000047050.3, ENSXETT00000047050.5
    Conserved Domains (1) summary
    cd14209
    Location:42 → 331
    STKc_PKA; Catalytic subunit of the Serine/Threonine Kinase, cAMP-dependent protein kinase

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    77759249..77813999 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031899710.1 → XP_031755570.1  cAMP-dependent protein kinase catalytic subunit beta isoform X1

    UniProtKB/TrEMBL
    A0A803KFQ7, A0A8J1JEX4
    Related
    ENSXETP00000119261.1, ENSXETT00000115639.1
    Conserved Domains (1) summary
    cd14209
    Location:87 → 376
    STKc_PKA; Catalytic subunit of the Serine/Threonine Kinase, cAMP-dependent protein kinase

  2. XM_031899711.1 → XP_031755571.1  cAMP-dependent protein kinase catalytic subunit beta isoform X2

    UniProtKB/TrEMBL
    A0A6I8Q9L3, A0A803JUQ3
    Related
    ENSXETP00000111746.1, ENSXETT00000123704.1
    Conserved Domains (1) summary
    cd14209
    Location:29 → 318
    STKc_PKA; Catalytic subunit of the Serine/Threonine Kinase, cAMP-dependent protein kinase
Nucleotide Protein Strain
Heading Accession and Version

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