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Gm2102 predicted gene 2102 [ Mus musculus (house mouse) ]

Gene ID: 100039210, updated on 23-Mar-2024

Summary

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Official Symbol
Gm2102provided by MGI
Official Full Name
predicted gene 2102provided by MGI
Primary source
MGI:MGI:3780270
See related
AllianceGenome:MGI:3780270
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in ovary adult (RPKM 1.5), limb E14.5 (RPKM 0.3) and 12 other tissues See more
Orthologs
human all
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Genomic context

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See Gm2102 in Genome Data Viewer
Location:
1 C4; 1 39.94 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (78191601..78194907, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (78214964..78218270, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene paired box 3 Neighboring gene Pax3 promoter region Neighboring gene Pax3 enhancer in intron 4 Neighboring gene Pax3 upstream hypaxial enhancer Neighboring gene predicted gene, 33152 Neighboring gene STARR-seq mESC enhancer starr_01424 Neighboring gene STARR-seq mESC enhancer starr_01425 Neighboring gene sphingosine-1-phosphate phosphatase 2 Neighboring gene predicted gene, 51634 Neighboring gene STARR-seq mESC enhancer starr_01426 Neighboring gene proteasome (prosome, macropain) subunit, alpha type 2 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC100039210

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001378660.1 → NP_001365589.1  uncharacterized protein LOC100039210

    Status: VALIDATED

    Source sequence(s)
    AC115893
    Conserved Domains (1) summary
    cl17238
    Location:57 → 126
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    78191601..78194907 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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