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Ccl19-ps4 C-C motif chemokine ligand 19, pseudogene 4 [ Mus musculus (house mouse) ]

Gene ID: 100040035, updated on 8-Feb-2024

Summary

Official Symbol
Ccl19-ps4provided by MGI
Official Full Name
C-C motif chemokine ligand 19, pseudogene 4provided by MGI
Primary source
MGI:MGI:3708691
See related
AllianceGenome:MGI:3708691
Gene type
pseudo
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm2564
Expression
Biased expression in spleen adult (RPKM 127.7), mammary gland adult (RPKM 77.4) and 6 other tissues See more
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Genomic context

Location:
4 A5; 4 22.71 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (42629753..42631714)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (42629756..42631714)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene C-C motif chemokine ligand 19, pseudogene 2 Neighboring gene protein FAM205A-2-like Neighboring gene C-C motif chemokine ligand 21E Neighboring gene C-C motif chemokine ligand 27b Neighboring gene interleukin 11 receptor subunit alpha 2 Neighboring gene predicted gene, 53182

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Other Names

  • chemokine (C-C motif) ligand 19, pseudogene

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables CCR chemokine receptor binding ISO
Inferred from Sequence Orthology
more info
 
enables CCR10 chemokine receptor binding ISO
Inferred from Sequence Orthology
more info
 
enables chemokine activity ISO
Inferred from Sequence Orthology
more info
 
enables chemokine receptor binding ISO
Inferred from Sequence Orthology
more info
 
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in antimicrobial humoral immune response mediated by antimicrobial peptide ISO
Inferred from Sequence Orthology
more info
 
involved_in biological_process ND
No biological Data available
more info
 
involved_in cellular response to virus ISO
Inferred from Sequence Orthology
more info
 
involved_in dendritic cell chemotaxis ISO
Inferred from Sequence Orthology
more info
 
involved_in establishment of T cell polarity ISO
Inferred from Sequence Orthology
more info
 
involved_in killing of cells of another organism ISO
Inferred from Sequence Orthology
more info
 
involved_in myeloid dendritic cell chemotaxis ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of dendritic cell apoptotic process ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of ERK1 and ERK2 cascade ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of JNK cascade ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of canonical NF-kappaB signal transduction ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of cell motility ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of neutrophil chemotaxis ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of non-canonical NF-kappaB signal transduction ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of protein kinase activity ISO
Inferred from Sequence Orthology
more info
 
involved_in release of sequestered calcium ion into cytosol ISO
Inferred from Sequence Orthology
more info
 
involved_in response to nitric oxide ISO
Inferred from Sequence Orthology
more info
 
involved_in response to prostaglandin E ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    42629753..42631714
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004691359.2 RNA Sequence