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Krtap4-25 keratin associated protein 4-25 [ Mus musculus (house mouse) ]

Gene ID: 100040248, updated on 20-Feb-2024

Summary

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Official Symbol
Krtap4-25provided by MGI
Official Full Name
keratin associated protein 4-25provided by MGI
Primary source
MGI:MGI:3650330
See related
Ensembl:ENSMUSG00000069718 AllianceGenome:MGI:3650330
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm11563; 2310045F10Rik
Summary
Orthologous to several human genes including KRTAP4-11 (keratin associated protein 4-11); KRTAP4-12 (keratin associated protein 4-12); and KRTAP4-6 (keratin associated protein 4-6). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
11 D; 11 63.0 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (99548768..99549785, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (99657942..99658959, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene keratin associated protein 4-7 Neighboring gene keratin associated protein 4-24 Neighboring gene STARR-seq mESC enhancer starr_30707 Neighboring gene keratin associated protein 4-6 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851
  2. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, et al. Nature, 2002 Dec 5. PMID 12466851

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
keratin associated protein 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001126320.2 → NP_001119792.1  keratin associated protein 4-like

    Status: VALIDATED

    Source sequence(s)
    AL590997
    Consensus CDS
    CCDS48913.1
    UniProtKB/TrEMBL
    B1AQ90
    Related
    ENSMUSP00000090369.4, ENSMUST00000092695.5
    Conserved Domains (2) summary
    pfam01500
    Location:38 → 167
    Keratin_B2; Keratin, high sulfur B2 protein
    pfam13885
    Location:54 → 98
    Keratin_B2_2; Keratin, high sulfur B2 protein

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    99548768..99549785 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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