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Gm2897 predicted gene 2897 [ Mus musculus (house mouse) ]

Gene ID: 100040671, updated on 3-Apr-2024

Summary

Official Symbol
Gm2897provided by MGI
Official Full Name
predicted gene 2897provided by MGI
Primary source
MGI:MGI:3781075
See related
Ensembl:ENSMUSG00000079410 AllianceGenome:MGI:3781075
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in CNS E18 (RPKM 6.0), whole brain E14.5 (RPKM 3.9) and 11 other tissues See more
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Genomic context

Location:
14 A2; 14 1.62 cM
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (19383485..19420488, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (3049285..3076840)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene predicted gene 5795 Neighboring gene STARR-seq mESC enhancer starr_35806 Neighboring gene predicted gene 10340 Neighboring gene esterase D/formylglutathione hydrolase, pseudogene Neighboring gene predicted gene 2888 Neighboring gene STARR-seq mESC enhancer starr_36073 Neighboring gene predicted gene, 41101

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001177715.2NP_001171186.1  alpha6-takusan-like

    See identical proteins and their annotated locations for NP_001171186.1

    Status: VALIDATED

    Source sequence(s)
    BC028273
    Consensus CDS
    CCDS49374.1
    UniProtKB/TrEMBL
    A6NAS3, K7N6T7
    Related
    ENSMUSP00000126277.2, ENSMUST00000166494.2
    Conserved Domains (1) summary
    pfam04822
    Location:170
    Takusan; Takusan

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    19383485..19420488 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036158301.1XP_036014194.1  alpha6-takusan-like isoform X1

    Conserved Domains (1) summary
    pfam04822
    Location:173
    Takusan
  2. XM_036158303.1XP_036014196.1  alpha6-takusan-like isoform X3

  3. XM_036158302.1XP_036014195.1  alpha6-takusan-like isoform X2

    UniProtKB/TrEMBL
    A0AA74KT48, A0AA74KUR0
    Conserved Domains (1) summary
    pfam04822
    Location:48128
    Takusan

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001177714.1: Suppressed sequence

    Description
    NM_001177714.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript.