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Gm3248 predicted gene 3248 [ Mus musculus (house mouse) ]

Gene ID: 100041279, updated on 8-Feb-2024

Summary

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Official Symbol
Gm3248provided by MGI
Official Full Name
predicted gene 3248provided by MGI
Primary source
MGI:MGI:3781426
See related
AllianceGenome:MGI:3781426
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Broad expression in CNS E18 (RPKM 2.5), whole brain E14.5 (RPKM 1.5) and 17 other tissues See more
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Genomic context

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See Gm3248 in Genome Data Viewer
Location:
14 A2; 14 3.22 cM
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (16508086..16576569)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (5893204..5961687, complement)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 51421 Neighboring gene predicted gene 17045 Neighboring gene predicted gene 8206 Neighboring gene predicted gene, 53827 Neighboring gene STARR-seq mESC enhancer starr_35818 Neighboring gene predicted gene 17048 Neighboring gene STARR-seq mESC enhancer starr_35817 Neighboring gene predicted gene 17046 Neighboring gene predicted gene 3373 Neighboring gene predicted gene 3424

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Takusan: a large gene family that regulates synaptic activity. Tu S, et al. Neuron, 2007 Jul 5. PMID 17610818, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
uncharacterized protein Gm3248

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    16508086..16576569
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017316327.2 → XP_017171816.1  uncharacterized protein Gm3248

    Conserved Domains (1) summary
    pfam04822
    Location:1 → 56
    Takusan

RNA

  1. XR_004938493.1 RNA Sequence

  2. XR_874205.3 RNA Sequence

  3. XR_874204.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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