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Gm3488 predicted gene, 3488 [ Mus musculus (house mouse) ]

Gene ID: 100041735, updated on 3-Apr-2024

Summary

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Official Symbol
Gm3488provided by MGI
Official Full Name
predicted gene, 3488provided by MGI
Primary source
MGI:MGI:3781665
See related
Ensembl:ENSMUSG00000095295 AllianceGenome:MGI:3781665
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm3488; Gm3494; 100041747
Expression
Broad expression in CNS E18 (RPKM 6.6), whole brain E14.5 (RPKM 4.2) and 15 other tissues See more
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Genomic context

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Location:
14 A2; 14
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (16946844..16968795, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (5500978..5522929)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 26893 Neighboring gene ribosomal protein L3 pseudogene Neighboring gene predicted gene 3532 Neighboring gene predicted gene 3187 Neighboring gene predicted gene 8246

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. Stryke D, et al. Nucleic Acids Res, 2003 Jan 1. PMID 12520002, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

General protein information

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Preferred Names
uncharacterized protein LOC100041735

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001256885.1 → NP_001243814.1  uncharacterized protein LOC100041735 isoform 2

    See identical proteins and their annotated locations for NP_001243814.1

    Status: PREDICTED

    Source sequence(s)
    AC188089
    UniProtKB/TrEMBL
    A0AA74KT48, M0QW81
    Related
    ENSMUSP00000137698.3, ENSMUST00000181562.9
    Conserved Domains (1) summary
    pfam04822
    Location:50 → 125
    Takusan; Takusan

  2. NM_001379607.1 → NP_001366536.1  uncharacterized protein LOC100041735 isoform 1

    Status: PREDICTED

    Source sequence(s)
    AC188089
    Conserved Domains (1) summary
    pfam04822
    Location:135 → 215
    Takusan

RNA

  1. NR_166826.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AC188089

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    16946844..16968795 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036158318.1 → XP_036014211.1  uncharacterized protein LOC100041735 isoform X2

    UniProtKB/TrEMBL
    A0AA74KSW7
    Conserved Domains (1) summary
    pfam04822
    Location:101 → 181
    Takusan

  2. XM_030247564.2 → XP_030103424.1  uncharacterized protein LOC100041735 isoform X3

    UniProtKB/TrEMBL
    A6NAS3, A6NAT8
    Related
    ENSMUSP00000159759.1, ENSMUST00000249433.1
    Conserved Domains (1) summary
    pfam04822
    Location:1 → 73
    Takusan

  3. XM_030247562.1 → XP_030103422.1  uncharacterized protein LOC100041735 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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