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Gm3596 predicted gene 3596 [ Mus musculus (house mouse) ]

Gene ID: 100041968, updated on 8-Feb-2024

Summary

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Official Symbol
Gm3596provided by MGI
Official Full Name
predicted gene 3596provided by MGI
Primary source
MGI:MGI:3781773
See related
AllianceGenome:MGI:3781773
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm3596 in Genome Data Viewer
Location:
12 C3; 12
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (79877883..79878641, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (79831109..79831867, complement)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_32594 Neighboring gene zinc finger, FYVE domain containing 26 Neighboring gene STARR-positive B cell enhancer ABC_E920 Neighboring gene STARR-positive B cell enhancer ABC_E4030 Neighboring gene STARR-positive B cell enhancer ABC_E10762 Neighboring gene RAD51 paralog B Neighboring gene STARR-positive B cell enhancer ABC_E3058 Neighboring gene STARR-seq mESC enhancer starr_32597 Neighboring gene STARR-seq mESC enhancer starr_32598 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:80612777-80612978 Neighboring gene STARR-positive B cell enhancer ABC_E3059 Neighboring gene STARR-seq mESC enhancer starr_32600 Neighboring gene STARR-positive B cell enhancer ABC_E5335 Neighboring gene STARR-positive B cell enhancer ABC_E1155 Neighboring gene STARR-positive B cell enhancer ABC_E5336 Neighboring gene STARR-seq mESC enhancer starr_32602 Neighboring gene STARR-seq mESC enhancer starr_32603 Neighboring gene STARR-seq mESC enhancer starr_32604 Neighboring gene STARR-seq mESC enhancer starr_32605 Neighboring gene STARR-seq mESC enhancer starr_32606 Neighboring gene VISTA enhancer mm1393 Neighboring gene STARR-seq mESC enhancer starr_32607 Neighboring gene predicted gene, 36048 Neighboring gene STARR-positive B cell enhancer ABC_E208 Neighboring gene STARR-seq mESC enhancer starr_32608 Neighboring gene STARR-positive B cell enhancer mm9_chr12:80984715-80985015 Neighboring gene predicted gene, 36132 Neighboring gene predicted gene, 46361 Neighboring gene predicted gene, 46362

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    79877883..79878641 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_381721.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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