U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Gm17768 predicted gene, 17768 [ Mus musculus (house mouse) ]

Gene ID: 100045125, updated on 8-Feb-2024

Summary

Official Symbol
Gm17768provided by MGI
Official Full Name
predicted gene, 17768provided by MGI
Primary source
MGI:MGI:5009932
See related
AllianceGenome:MGI:5009932
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in placenta adult (RPKM 2.2) and testis adult (RPKM 0.4) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
7 B3; 7 28.25 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (42727475..42752087)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (43078051..43102663)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene ribosomal protein S4, X-linked pseudogene Neighboring gene vomeronasal 2, receptor, pseudogene 158 Neighboring gene ribosomal protein L18A, pseudogene 4 Neighboring gene STARR-seq mESC enhancer starr_18756 Neighboring gene zinc finger protein 936 Neighboring gene predicted gene, 53348 Neighboring gene zinc finger protein 120 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General protein information

Preferred Names
uncharacterized protein LOC100045125

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001378680.1NP_001365609.1  uncharacterized protein LOC100045125

    Status: VALIDATED

    Source sequence(s)
    AC167161
    Conserved Domains (5) summary
    COG5048
    Location:129280
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:68182
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:189209
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:444
    KRAB; KRAB box
    pfam13465
    Location:313338
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    42727475..42752087
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)