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tp53 tumor protein p53 [ Oryzias latipes (Japanese medaka) ]

Gene ID: 100049321, updated on 5-Aug-2022

Summary

Gene symbol
tp53
Gene description
tumor protein p53
See related
EnsemblRapid:ENSORLG00000006390
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Also known as
p53
Orthologs
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Genomic context

See tp53 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
11
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 18 NC_019876.2 (14488466..14497260)
102 previous assembly ASM31367v1 (GCF_000313675.1) 18 NC_019876.1 (15005133..15014025)

Chromosome 18 - NC_019876.2Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 5A Neighboring gene Y-box binding protein 2 Neighboring gene solute carrier family 2 member 4 Neighboring gene receptor-type tyrosine-protein phosphatase eta-like Neighboring gene receptor-type tyrosine-protein phosphatase eta

Genomic regions, transcripts, and products

General protein information

Preferred Names
cellular tumor antigen p53
Names
tumor suppressor p53
tumor suppressor protein p53

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001104742.1NP_001098212.1  cellular tumor antigen p53

    See identical proteins and their annotated locations for NP_001098212.1

    Status: PROVISIONAL

    Source sequence(s)
    AF003949
    UniProtKB/Swiss-Prot
    P79820, Q9PSU8
    Related
    ENSORLP00000008031.3, ENSORLT00000008032.3
    Conserved Domains (2) summary
    pfam07710
    Location:299335
    P53_tetramer; P53 tetramerisation motif
    cl14608
    Location:87270
    P53; P53 DNA-binding domain

RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019876.2 Reference ASM223467v1 Primary Assembly

    Range
    14488466..14497260
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023965765.1XP_023821533.1  cellular tumor antigen p53 isoform X1

    Related
    ENSORLP00000068455.1, ENSORLT00000050759.1
    Conserved Domains (2) summary
    pfam07710
    Location:298334
    P53_tetramer; P53 tetramerisation motif
    cl14608
    Location:86269
    P53; P53 DNA-binding domain