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tert telomerase reverse transcriptase [ Oryzias latipes (Japanese medaka) ]

Gene ID: 100049443, updated on 7-Jun-2022

Summary

Gene symbol
tert
Gene description
telomerase reverse transcriptase
See related
EnsemblRapid:ENSORLG00000013929
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
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Genomic context

See tert in Genome Data Viewer
Location:
chromosome: 11
Exon count:
18
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 11 NC_019869.2 (25692987..25705016, complement)
102 previous assembly ASM31367v1 (GCF_000313675.1) 11 NC_019869.1 (26623671..26635672, complement)

Chromosome 11 - NC_019869.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105355161 Neighboring gene sodium-dependent neutral amino acid transporter B(0)AT1 Neighboring gene solute carrier family 6 member 18 Neighboring gene syncoilin, intermediate filament protein Neighboring gene KIAA1522 ortholog

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General protein information

Preferred Names
telomerase reverse transcriptase
Names
Telomerase catalytic subunit
NP_001098286.1
XP_011479649.1
XP_011479650.1
XP_020562532.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001104816.1NP_001098286.1  telomerase reverse transcriptase

    See identical proteins and their annotated locations for NP_001098286.1

    Status: PROVISIONAL

    Source sequence(s)
    DQ248968
    UniProtKB/Swiss-Prot
    Q1PS67
    Conserved Domains (3) summary
    smart00975
    Location:427560
    Telomerase_RBD; Telomerase ribonucleoprotein complex - RNA binding domain
    cd01648
    Location:783894
    TERT; TERT: Telomerase reverse transcriptase (TERT). Telomerase is a ribonucleoprotein (RNP) that synthesizes telomeric DNA repeats. The telomerase RNA subunit provides the template for synthesis of these repeats. The catalytic subunit of RNP is known as ...
    cl02808
    Location:637683
    RT_like; RT_like: Reverse transcriptase (RT, RNA-dependent DNA polymerase)_like family. An RT gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. RTs occur in a variety of mobile elements, including retrotransposons, ...

RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019869.2 Reference ASM223467v1 Primary Assembly

    Range
    25692987..25705016 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011481347.3XP_011479649.1  telomerase reverse transcriptase isoform X1

    Conserved Domains (3) summary
    smart00975
    Location:427560
    Telomerase_RBD; Telomerase ribonucleoprotein complex - RNA binding domain
    cd01648
    Location:783894
    TERT; TERT: Telomerase reverse transcriptase (TERT). Telomerase is a ribonucleoprotein (RNP) that synthesizes telomeric DNA repeats. The telomerase RNA subunit provides the template for synthesis of these repeats. The catalytic subunit of RNP is known as ...
    cl02808
    Location:637683
    RT_like; RT_like: Reverse transcriptase (RT, RNA-dependent DNA polymerase)_like family. An RT gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. RTs occur in a variety of mobile elements, including retrotransposons, ...
  2. XM_020706873.2XP_020562532.1  telomerase reverse transcriptase isoform X1

    Related
    ENSORLP00000072824.1, ENSORLT00000052145.1
    Conserved Domains (3) summary
    smart00975
    Location:427560
    Telomerase_RBD; Telomerase ribonucleoprotein complex - RNA binding domain
    cd01648
    Location:783894
    TERT; TERT: Telomerase reverse transcriptase (TERT). Telomerase is a ribonucleoprotein (RNP) that synthesizes telomeric DNA repeats. The telomerase RNA subunit provides the template for synthesis of these repeats. The catalytic subunit of RNP is known as ...
    cl02808
    Location:637683
    RT_like; RT_like: Reverse transcriptase (RT, RNA-dependent DNA polymerase)_like family. An RT gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. RTs occur in a variety of mobile elements, including retrotransposons, ...
  3. XM_011481348.3XP_011479650.1  telomerase reverse transcriptase isoform X2

    Related
    ENSORLP00000017467.3, ENSORLT00000017468.3
    Conserved Domains (3) summary
    smart00975
    Location:427559
    Telomerase_RBD; Telomerase ribonucleoprotein complex - RNA binding domain
    cd01648
    Location:782893
    TERT; TERT: Telomerase reverse transcriptase (TERT). Telomerase is a ribonucleoprotein (RNP) that synthesizes telomeric DNA repeats. The telomerase RNA subunit provides the template for synthesis of these repeats. The catalytic subunit of RNP is known as ...
    cl02808
    Location:636682
    RT_like; RT_like: Reverse transcriptase (RT, RNA-dependent DNA polymerase)_like family. An RT gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. RTs occur in a variety of mobile elements, including retrotransposons, ...