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psmb8a proteasome 20S subunit beta 8A [ Oryzias latipes (Japanese medaka) ]

Gene ID: 100049532, updated on 7-Jun-2022

Summary

Gene symbol
psmb8a
Gene description
proteasome 20S subunit beta 8A
See related
EnsemblRapid:ENSORLG00000006783
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Also known as
psmb8
Orthologs
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Genomic context

See psmb8a in Genome Data Viewer
Location:
chromosome: 11
Exon count:
6
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 11 NC_019869.2 (15859984..15864696)
102 previous assembly ASM31367v1 (GCF_000313675.1) Unplaced Scaffold NW_004091787.1 (424..3409)

Chromosome 11 - NC_019869.2Genomic Context describing neighboring genes Neighboring gene proteasome 20S subunit beta 9a Neighboring gene proteasome 20S subunit beta 12 Neighboring gene proteasome 20S subunit beta 13a Neighboring gene major histocompatibility complex class I-related gene protein-like Neighboring gene major histocompatibility complex class I-related gene protein-like

Genomic regions, transcripts, and products

General protein information

Preferred Names
proteasome subunit beta type-8
Names
proteasome 20S subunit beta 8
proteasome subunit beta 8
proteasome subunit, beta type 8
NP_001171881.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001184952.1NP_001171881.1  proteasome subunit beta type-8

    See identical proteins and their annotated locations for NP_001171881.1

    Status: PROVISIONAL

    Source sequence(s)
    AB450987
    UniProtKB/TrEMBL
    Q8UUL7
    Related
    ENSORLP00000027304.2, ENSORLT00000037317.2
    Conserved Domains (2) summary
    PTZ00488
    Location:41270
    PTZ00488; Proteasome subunit beta type-5; Provisional
    cd03761
    Location:72259
    proteasome_beta_type_5; proteasome beta type-5 subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that ...

RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019869.2 Reference ASM223467v1 Primary Assembly

    Range
    15859984..15864696
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)