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Krt83 keratin 83 [ Mus musculus (house mouse) ]

Gene ID: 100126226, updated on 23-Jun-2021

Summary

Official Symbol
Krt83provided by MGI
Official Full Name
keratin 83provided by MGI
Primary source
MGI:MGI:3690448
See related
Ensembl:ENSMUSG00000067613
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
5430421N21Rik
Expression
Biased expression in subcutaneous fat pad adult (RPKM 3.0), ovary adult (RPKM 0.7) and 3 other tissues See more
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Genomic context

See Krt83 in Genome Data Viewer
Location:
15; 15 F2
Exon count:
9
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (101383011..101389393, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (101485130..101491512, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (101315561..101321937, complement)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene keratin 81 Neighboring gene keratin 86 Neighboring gene type II keratin Kb32P Neighboring gene predicted gene, 53914 Neighboring gene keratin 85

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 

General protein information

Preferred Names
type II hair keratin
Names
keratin type II

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001201323.1NP_001188252.1  type II hair keratin

    Status: VALIDATED

    Source sequence(s)
    AI561926, AK133718
    Consensus CDS
    CCDS49735.1
    UniProtKB/TrEMBL
    E9Q1Y9
    Related
    ENSMUSP00000023718.8, ENSMUST00000023718.9
    Conserved Domains (3) summary
    pfam00038
    Location:103414
    Filament; Intermediate filament protein
    pfam16208
    Location:38100
    Keratin_2_head; Keratin type II head
    cl23720
    Location:313381
    RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    101383011..101389393 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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