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FAM66E family with sequence similarity 66 member E [ Homo sapiens (human) ]

Gene ID: 100132103, updated on 8-Nov-2023

Summary

Official Symbol
FAM66Eprovided by HGNC
Official Full Name
family with sequence similarity 66 member Eprovided by HGNC
Primary source
HGNC:HGNC:18735
See related
Ensembl:ENSG00000225725 AllianceGenome:HGNC:18735
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in brain (RPKM 1.9), prostate (RPKM 1.0) and 22 other tissues See more
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Genomic context

Location:
8p23.1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (7955013..8008755)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (12100980..12154357)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (7812535..7866277)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2-like Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:7760080-7761002 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:7761003-7761923 Neighboring gene defensin beta 4A Neighboring gene zinc finger protein 705B Neighboring gene defensin beta 108A Neighboring gene ubiquitin carboxyl-terminal hydrolase 17-like protein 2-like Neighboring gene ubiquitin specific peptidase 17 like family member 8 Neighboring gene ubiquitin specific peptidase 17 like family member 3 Neighboring gene defensin beta 109C Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:7877325-7877826 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:7877827-7878326 Neighboring gene family with sequence similarity 90 member A11 Neighboring gene family with sequence similarity 90 member A24

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027424.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AC105233, AC130365
    Related
    ENST00000529252.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    7955013..8008755
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_018654717.1 Reference GRCh38.p14 PATCHES

    Range
    864027..917750
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    12100980..12154357
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)