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POLR3E RNA polymerase III subunit E [ Bos taurus (cattle) ]

Gene ID: 100140537, updated on 8-Mar-2024

Summary

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Official Symbol
POLR3Eprovided by VGNC
Official Full Name
RNA polymerase III subunit Eprovided by VGNC
Primary source
VGNC:VGNC:33149
See related
BGD:BT21992; Ensembl:ENSBTAG00000018044
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 25
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 25 NC_037352.1 (19969462..20002851)

Chromosome 25 - NC_037352.1Genomic Context describing neighboring genes Neighboring gene eukaryotic elongation factor 2 kinase Neighboring gene transfer RNA leucine (anticodon AAG) Neighboring gene transmembrane protein 180 Neighboring gene cerebellar degeneration related protein 2 Neighboring gene methyltransferase like 9 Neighboring gene immunoglobulin superfamily member 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037352.1 Chromosome 25 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerase III subunit RPC5
Names
polymerase (RNA) III (DNA directed) polypeptide E (80kD)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037352.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    19969462..20002851
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059881563.1 → XP_059737546.1  DNA-directed RNA polymerase III subunit RPC5 isoform X1

    UniProtKB/TrEMBL
    E1BKG7

  2. XM_024985130.2 → XP_024840898.1  DNA-directed RNA polymerase III subunit RPC5 isoform X1

    UniProtKB/TrEMBL
    E1BKG7
    Related
    ENSBTAP00000083858.1, ENSBTAT00000106330.1
    Conserved Domains (1) summary
    pfam04801
    Location:5 → 432
    Sin_N; Sin-like protein conserved region

  3. XM_024985129.2 → XP_024840897.1  DNA-directed RNA polymerase III subunit RPC5 isoform X1

    UniProtKB/TrEMBL
    E1BKG7
    Related
    ENSBTAP00000043258.4, ENSBTAT00000045908.4
    Conserved Domains (1) summary
    pfam04801
    Location:5 → 432
    Sin_N; Sin-like protein conserved region

  4. XM_024985132.2 → XP_024840900.1  DNA-directed RNA polymerase III subunit RPC5 isoform X2

    Related
    ENSBTAP00000097530.1, ENSBTAT00000115507.1
    Conserved Domains (1) summary
    pfam04801
    Location:5 → 392
    Sin_N; Sin-like protein conserved region

  5. XM_024985133.2 → XP_024840901.1  DNA-directed RNA polymerase III subunit RPC5 isoform X3

    Related
    ENSBTAP00000088311.1, ENSBTAT00000111009.1
    Conserved Domains (1) summary
    pfam04801
    Location:1 → 373
    Sin_N; Sin-like protein conserved region

  6. XM_024985134.2 → XP_024840902.1  DNA-directed RNA polymerase III subunit RPC5 isoform X4

    Conserved Domains (1) summary
    pfam04801
    Location:3 → 306
    Sin_N; Sin-like protein conserved region
Nucleotide Protein Strain
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