tnfrsf1a TNF receptor superfamily member 1A [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: tnfrsf1aprovided by Xenbase
Official Full Name: TNF receptor superfamily member 1Aprovided by Xenbase
Primary source: Xenbase:XB-GENE-996080
See related: Ensembl:ENSXETG00000032118
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as: fpf; p55; tbp1; p55-r; tnf-r; tnfar; tnfr1; cd120a; tnfr55; tnfr60
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 7

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	7	NC_030683.2 (10208354..10239354)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	7	NC_030683.1 (1880587..1910852)

Chromosome 7 - NC_030683.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Process	Evidence Code	Pubs
acts_upstream_of_or_within apoptotic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within signal transduction	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in plasma membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: tumor necrosis factor receptor superfamily member 1A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001126504.1 → NP_001119976.1 tumor necrosis factor receptor superfamily member 1A precursor

See identical proteins and their annotated locations for NP_001119976.1

Status: PROVISIONAL

Source sequence(s)

BC158220

UniProtKB/TrEMBL

A0A6I8PW21, B0BLZ4

Related

ENSXETP00000101938.1, ENSXETT00000122492.1

Conserved Domains (2) summary

cd08313
Location:328 → 407

Death_TNFR1; Death domain of Tumor Necrosis Factor Receptor 1

cd10576
Location:58 → 187

TNFRSF1A; Tumor necrosis factor receptor superfamily member 1A (TNFRSF1A), also known as TNFR1