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mapre2 microtubule associated protein RP/EB family member 2 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100145479, updated on 8-Mar-2024

Summary

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Official Symbol
mapre2provided by Xenbase
Official Full Name
microtubule associated protein RP/EB family member 2provided by Xenbase
Primary source
Xenbase:XB-GENE-6455519
See related
Ensembl:ENSXETG00000035703
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
eb2; rp1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (112853750..112928649)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (97953017..98027678)

Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene nucleolar protein 4 Neighboring gene dystrobrevin alpha Neighboring gene uncharacterized LOC100145789 Neighboring gene scaffold protein involved in DNA repair Neighboring gene U2 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cell cycle IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within cell division IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
  
located_in microtubule IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
microtubule-associated protein RP/EB family member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001126931.2 → NP_001120403.1  microtubule-associated protein RP/EB family member 2

    See identical proteins and their annotated locations for NP_001120403.1

    Status: PROVISIONAL

    Source sequence(s)
    BC161118
    UniProtKB/TrEMBL
    A0A6I8S3B5, B1H2T1, F6ZE35
    Related
    ENSXETP00000085865.1, ENSXETT00000098639.2
    Conserved Domains (1) summary
    COG5217
    Location:58 → 314
    BIM1; Microtubule-binding protein involved in cell cycle control [Cell division and chromosome partitioning / Cytoskeleton]

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    112853750..112928649
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012964294.2 → XP_012819748.1  microtubule-associated protein RP/EB family member 2 isoform X1

    See identical proteins and their annotated locations for XP_012819748.1

    UniProtKB/TrEMBL
    A0A6I8S3B5, A0A8J0SFJ1
    Conserved Domains (1) summary
    COG5217
    Location:16 → 272
    BIM1; Microtubule-binding protein involved in cell cycle control [Cell division and chromosome partitioning / Cytoskeleton]

  2. XM_012964295.3 → XP_012819749.1  microtubule-associated protein RP/EB family member 2 isoform X1

    See identical proteins and their annotated locations for XP_012819749.1

    UniProtKB/TrEMBL
    A0A6I8S3B5, A0A8J0SFJ1
    Conserved Domains (1) summary
    COG5217
    Location:16 → 272
    BIM1; Microtubule-binding protein involved in cell cycle control [Cell division and chromosome partitioning / Cytoskeleton]
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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