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mepceb methylphosphate capping enzyme b [ Danio rerio (zebrafish) ]

Gene ID: 100151157, updated on 11-Apr-2024

Summary

Official Symbol
mepcebprovided by ZNC
Official Full Name
methylphosphate capping enzyme bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-110411-13
See related
Ensembl:ENSDARG00000035771 AllianceGenome:ZFIN:ZDB-GENE-110411-13
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:ch1073-157b13.1
Summary
Predicted to enable O-methyltransferase activity; RNA methyltransferase activity; and snRNA binding activity. Predicted to be involved in snRNA modification. Predicted to act upstream of or within methylation. Orthologous to human MEPCE (methylphosphate capping enzyme). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See mepceb in Genome Data Viewer
Location:
chromosome: 23
Exon count:
5
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 23 NC_007134.7 (44236249..44251006)
105 previous assembly GRCz10 (GCF_000002035.5) 23 NC_007134.6 (44470230..44485082)

Chromosome 23 - NC_007134.7Genomic Context describing neighboring genes Neighboring gene coronin 2Ab Neighboring gene zgc:158659 Neighboring gene discs, large homolog 4b (Drosophila) Neighboring gene eph receptor B4b

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables O-methyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables RNA methyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables snRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within methylation IEA
Inferred from Electronic Annotation
more info
 
involved_in snRNA modification IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
7SK snRNA methylphosphate capping enzyme-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007134.7 Reference GRCz11 Primary Assembly

    Range
    44236249..44251006
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001921694.5XP_001921729.2  7SK snRNA methylphosphate capping enzyme-like

    UniProtKB/TrEMBL
    A0A8M1QV31, F1R4M0
    Related
    ENSDARP00000123928.1, ENSDART00000149842.3
    Conserved Domains (2) summary
    pfam06859
    Location:515622
    Bin3; Bicoid-interacting protein 3 (Bin3)
    pfam12847
    Location:384557
    Methyltransf_18; Methyltransferase domain