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prkag2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100158499, updated on 8-Mar-2024

Summary

Official Symbol
prkag2provided by Xenbase
Official Full Name
protein kinase, AMP-activated, gamma 2 non-catalytic subunitprovided by Xenbase
Primary source
Xenbase:XB-GENE-1010726
See related
Ensembl:ENSXETG00000009727
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
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Genomic context

Location:
chromosome: 6
Exon count:
19
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (14455277..14604944, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (6787482..6939416, complement)

Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene crystallin gamma N Neighboring gene Ras homolog, mTORC1 binding Neighboring gene uncharacterized LOC101730607 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 11

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables kinase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within phosphorylation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
5'-AMP-activated protein kinase subunit gamma-2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001127939.1NP_001121411.1  5'-AMP-activated protein kinase subunit gamma-2

    See identical proteins and their annotated locations for NP_001121411.1

    Status: PROVISIONAL

    Source sequence(s)
    BC166111
    UniProtKB/TrEMBL
    A0A6I8QR84, B2GU31
    Related
    ENSXETP00000070945.2, ENSXETT00000068210.2
    Conserved Domains (3) summary
    COG0517
    Location:194310
    CBS; CBS domain [Signal transduction mechanisms]
    cd04618
    Location:37166
    CBS_pair_5; The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called ...
    cd04641
    Location:193312
    CBS_pair_28; The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called ...

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    14455277..14604944 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012964332.3XP_012819786.1  5'-AMP-activated protein kinase subunit gamma-2 isoform X1

    UniProtKB/TrEMBL
    A0A6I8RFF7, A0A6I8S4Y8, F6TAZ5
    Related
    ENSXETP00000021429.3, ENSXETT00000021429.4
    Conserved Domains (4) summary
    COG0517
    Location:424540
    CBS; CBS domain [Signal transduction mechanisms]
    cd04618
    Location:267396
    CBS_pair_5; The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called ...
    cd04641
    Location:423542
    CBS_pair_28; The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called ...
    pfam16643
    Location:8112
    cNMPbd_u2; Unstructured region on cNMP-binding protein
  2. XM_012964333.3XP_012819787.1  5'-AMP-activated protein kinase subunit gamma-2 isoform X2

    UniProtKB/TrEMBL
    A0A6I8RFF7, A0A6I8S3A5
    Related
    ENSXETP00000089361.2, ENSXETT00000072697.2
    Conserved Domains (3) summary
    COG0517
    Location:387503
    CBS; CBS domain [Signal transduction mechanisms]
    cd04618
    Location:230359
    CBS_pair_5; The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called ...
    cd04641
    Location:386505
    CBS_pair_28; The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called ...
  3. XM_012964334.3XP_012819788.1  5'-AMP-activated protein kinase subunit gamma-2 isoform X3

    UniProtKB/TrEMBL
    A0A8J0SML1
    Conserved Domains (2) summary
    cd04618
    Location:140277
    CBS_euAMPK_gamma-like_repeat1; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains found in AMP-activated protein kinase gamma-like proteins, repeat 1
    cd04641
    Location:303426
    CBS_euAMPK_gamma-like_repeat2; CBS pair domain found in 5'-AMP (adenosine monophosphate)-activated protein kinase
  4. XM_012964335.3XP_012819789.1  5'-AMP-activated protein kinase subunit gamma-2 isoform X4

    UniProtKB/TrEMBL
    A0A6I8QR84, A0A6I8QXX0
    Related
    ENSXETP00000073976.2, ENSXETT00000093736.2
    Conserved Domains (3) summary
    COG0517
    Location:194310
    CBS; CBS domain [Signal transduction mechanisms]
    cd04618
    Location:37166
    CBS_pair_5; The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called ...
    cd04641
    Location:193312
    CBS_pair_28; The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called ...