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phf5a PHD finger protein 5A [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100170460, updated on 8-Mar-2024

Summary

Official Symbol
phf5aprovided by Xenbase
Official Full Name
PHD finger protein 5Aprovided by Xenbase
Primary source
Xenbase:XB-GENE-976801
See related
Ensembl:ENSXETG00000006893
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
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Genomic context

Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (120352630..120358121)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (109952722..109958230)

Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene polymerase (RNA) III (DNA directed) polypeptide H (22.9kD) Neighboring gene aconitase 2 Neighboring gene transducer of ERBB2, 2 Neighboring gene GTP binding protein 1

Genomic regions, transcripts, and products

General protein information

Preferred Names
PHD finger-like domain-containing protein 5A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001130240.1NP_001123712.1  PHD finger-like domain-containing protein 5A

    See identical proteins and their annotated locations for NP_001123712.1

    Status: PROVISIONAL

    Source sequence(s)
    BC167322
    UniProtKB/TrEMBL
    B3DL60, F6UDV6
    Related
    ENSXETP00000015083.3, ENSXETT00000015083.5
    Conserved Domains (1) summary
    pfam03660
    Location:1104
    PHF5; PHF5-like protein

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    120352630..120358121
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)